issues
search
NationalGenomicsInfrastructure
/
taca-ngi-pipeline
A TACA plugin adding functionality relevant for the ngi_pipeline
MIT License
3
stars
13
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Swith to run folder tarball
#82
chuan-wang
opened
6 days ago
4
Update deliver_dds.py
#81
FranBonath
opened
3 months ago
0
Remove unused travis building and badge and update tests
#80
aanil
closed
8 months ago
0
Include NovaSeqXPlus in xml genetation
#79
ssjunnebo
closed
1 year ago
0
Fix DDS runfolder delivery
#78
ssjunnebo
closed
1 year ago
0
Catch exception and fix filepath
#77
aanil
closed
1 year ago
0
Process md5 checksum file in correct format
#76
aanil
closed
1 year ago
0
Always include requester in DDS delivery
#75
ssjunnebo
closed
2 years ago
0
Replace project description to project name plus date
#74
chuan-wang
closed
2 years ago
0
Remove mention of ports in statusdb messages
#73
aanil
closed
2 years ago
0
Use PID as dds project title
#72
ssjunnebo
closed
2 years ago
1
Make compatible with newer click version
#71
ssjunnebo
closed
2 years ago
0
Set default grus delivery to 45 days
#70
ssjunnebo
closed
2 years ago
0
No user email option
#69
ssjunnebo
closed
2 years ago
1
DDS improvements
#68
ssjunnebo
closed
2 years ago
0
Shorten grus delivery end date
#67
ssjunnebo
closed
2 years ago
0
DDS integration
#66
ssjunnebo
closed
2 years ago
0
Fix encoding issue for python3
#65
ssjunnebo
closed
3 years ago
0
Run tests with gh actions
#64
ssjunnebo
closed
2 years ago
0
commit to test travis
#63
ssjunnebo
closed
3 years ago
0
Port to python 3
#62
ssjunnebo
closed
3 years ago
2
converting path to realpath
#61
ghost
closed
3 years ago
0
Fix requirements collision
#60
ghost
closed
3 years ago
0
Delivery readme fixes
#59
ghost
closed
3 years ago
2
Merge snic_util.py with taca_ngi_pipeline
#58
ghost
closed
4 months ago
1
Add RNASeq and Sarek delivery readmes
#57
aanil
closed
3 years ago
1
Add new sthlm delivery readmes
#56
aanil
closed
3 years ago
2
Remove unused code
#55
ssjunnebo
closed
3 years ago
2
Fix files names for xml files
#54
aanil
closed
3 years ago
0
Update file path in manifest file, fix bug in dp_strategy and minor c…
#53
aanil
closed
3 years ago
1
Irma deployment fixes
#52
ssjunnebo
closed
4 years ago
0
Fix small bug in error handling
#51
ssjunnebo
closed
4 years ago
0
Add option to generate xml and manifest files by themselves
#50
aanil
closed
4 years ago
3
Create hard stage delivery dir only after all proceed ques are answered yes
#49
aanil
closed
4 years ago
0
Add manifest file generation
#48
aanil
closed
4 years ago
3
Moved ENA xml generation from ngi_reports to the soft staging step
#47
aanil
closed
4 years ago
2
Fix issue with click 7.1
#46
ssjunnebo
closed
4 years ago
0
add PR label enforcer
#45
ssjunnebo
closed
4 years ago
1
Fix indentation error
#44
ssjunnebo
closed
4 years ago
0
Run folder delivery on Irma
#43
ssjunnebo
closed
5 years ago
1
Changed saving metainfo to samplewise when softstaging and added date
#42
aanil
closed
5 years ago
0
Adds the delivery project to Project page on statusdb when doing GRUS delivery
#41
aanil
closed
5 years ago
0
fix for Charon 'not_under_delivery' status
#40
aanil
closed
6 years ago
0
Dont try to set PI details for check_status
#39
senthil10
closed
6 years ago
0
Update metainfo to statusdb
#38
senthil10
closed
6 years ago
1
Include Bioinfo contact while generating GRUS project
#37
senthil10
closed
6 years ago
5
Better way to deliver miscellaneous files
#36
senthil10
closed
6 years ago
4
TACA deliver updates
#35
senthil10
closed
6 years ago
8
now also md5 sums are tranfered to hard stage directory
#34
vezzi
closed
7 years ago
0
Bug fix and version bump
#33
vezzi
closed
7 years ago
0
Next