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Neural-Systems-at-UIO / LocaliZoom

Localizoom viewer https://localizoom.readthedocs.io
MIT License
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LocaliZoom links (nonlinear) #27

Closed ingvildeb closed 3 years ago

ingvildeb commented 3 years ago

I have two datasets for which I would like to have LocaliZoom links for the nonlinear registration.

The JSON files can be found here: Z:\HBP_Curation\QuickNII_projects\Projects\Finished projects\Atlas_of_parvalbumin_and_somatostatin\Nonlin_JSONs and the corresponding Navigator blocks are:

1301_4184_6006 (rat 25203) 1301_4224_6066 (rat 25204) 1301_4204_6046 (rat 25205) 1301_4164_5986 (rat 25206) 1301_4244_6086 (mouse 81264) 1301_4247_6091 (mouse 81265) 1301_4245_6089 (mouse 81266) 1301_4246_6090 (mouse 81267)

Thanks!

Ingvild

Tevemadar commented 3 years ago

Rat base links (with v3): https://www.nesys.uio.no/NonLinTest/filmstripzoom.html?atlas=200100&series=5986 https://www.nesys.uio.no/NonLinTest/filmstripzoom.html?atlas=200100&series=6006 https://www.nesys.uio.no/NonLinTest/filmstripzoom.html?atlas=200100&series=6046 https://www.nesys.uio.no/NonLinTest/filmstripzoom.html?atlas=200100&series=6066 Mouse base links (v3 2017): https://www.nesys.uio.no/NonLinTest/filmstripzoom.html?atlas=300100&series=6086 https://www.nesys.uio.no/NonLinTest/filmstripzoom.html?atlas=300100&series=6089 https://www.nesys.uio.no/NonLinTest/filmstripzoom.html?atlas=300100&series=6090 https://www.nesys.uio.no/NonLinTest/filmstripzoom.html?atlas=300100&series=6091 Links use the block identifier (the 3rd-level Navigator ID), for example the first one with 5986 belongs to rat 25206 Possible extra parameters: