EBRAINS LocaliZoom serial section image viewer provides an intuitive way of navigating high resolution 2D image series coupled with segmentation overlay, from a web browser. At its core, it is a web-based pan-and-zoom 2D image viewer coupled with a volumetric atlas slicer, and a navigational aid showing the entire image series as a “filmstrip”. Building on the open standard Deep Zoom Image (DZI) format, it is able to efficiently visualise very large brain images in the gigapixel range, allowing to zoom from common, display-sized overview resolutions down to the microscopic resolution without downloading the underlying very large image dataset.
Localizoom is developed by the Neural Systems Laboratory at the Institute of Basic Medical Sciences, University of Oslo, Norway. Localizoom was developed with support from the EBRAINS infrastructure, and funding from the European Union’s Horizon 2020 Framework Programme for Research and Innovation under the Framework Partnership Agreement No. 650003 (HBP FPA).
Gergely Csucs
Maja A Puchades, Jan G Bjaalie.
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