Closed zskey-zn closed 2 years ago
I suppose the problem in this.
export SLURM_ROOT=/opt/gridview/slurm export SLURM_CELL=default
in SGE: the correct code is
export SGE_ROOT=/opt/sge export SGE_CELL=default
so, when I run the nextdenovo code in slurm, how to set "root" and "cell" in my code?
Try the latest version, which does not require drmaa
.
Hi,
thanks, I will try it soon.
Best wish for you!
------------------ 原始邮件 ------------------ 发件人: "Nextomics/NextDenovo" @.>; 发送时间: 2021年10月13日(星期三) 中午1:36 @.>; @.**@.>; 主题: Re: [Nextomics/NextDenovo] error on slurm system (#127)
Try the latest version, which does not require drmaa.
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Describe the bug Hi, I run nextdenovo(2.4.0) on slurm sysytem, but it can't work Successfully.I have downloaded these package.
Error message
my cfg file
how to dedug this problem?