How to know which reads are used in the assembled conting

Nextomics / NextDenovo

Fast and accurate de novo assembler for long reads

GNU General Public License v3.0

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Closed kuangzhuoran closed 2 years ago

kuangzhuoran commented 2 years ago

Question or Expected behavior How to know which reads are used in the assembled conting

Operating system Linux

GCC gcc version 8.5.0 20210514 (Red Hat 8.5.0-4) (GCC)

Python Python 3.8.3

NextDenovo nextDenovo v2.5.0

moold commented 2 years ago

The easiest way is to map the corrected reads to the assembly sequences.