Nextomics / NextDenovo

Fast and accurate de novo assembler for long reads
GNU General Public License v3.0
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Can I assemble a gap free genome using only regular ONT data? #181

Closed XXH123a closed 1 year ago

XXH123a commented 1 year ago

Dear Dr. Hu,

For example, the assembly results of merge Nextdenovo and Necat, or assembling both at the chromosome level to fill the gap? My Genome size is 1G in size and has 36 chromosomes. I just want to get one or two gapfree. You think that method is better or not?

moold commented 1 year ago

It's hard to say, I'm not sure