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Nextomics / NextDenovo

Fast and accurate de novo assembler for long reads
GNU General Public License v3.0
350 stars 52 forks source link

Test won't run #201

Closed JWrighty97 closed 3 months ago

JWrighty97 commented 3 months ago

Describe the bug A clear and concise description of what the bug or error is.

When I try to execute nextDenovo on test_data/run.cfg the nextDenovo command is not found. The file has been downloaded and openable with nano nextDenovo however does not seem to be working.

I have tried two separate downloads, from the link and importing from Git however neither seem to leave me with an executable file.

Is there anything you would suggest?

Operating system Which operating system and version are you using? You can use the command lsb_release -a to get it.

MacOS

GCC What version of GCC are you using? You can use the command gcc -v to get it.

Apple clang version 15.0.0 (clang-1500.1.0.2.5)

Python What version of Python are you using? You can use the command python --version to get it.

Python 3.12.2

moold commented 3 months ago

If you install NextDenovo to this directory: path_to_nextDenovo, then try path_to_nextDenovo/nextDenovo test_data/run.cfg