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Nextomics / NextDenovo

Fast and accurate de novo assembler for long reads
GNU General Public License v3.0
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the disk consuming for raw reads correction #83

Open longzhangnation opened 3 years ago

longzhangnation commented 3 years ago

Hi， Ｉ am planning to use Nextdenovo for my nanopore reads correction , but it is unsure for me how much hard disk the file will take . As for my sequencing data ,its size is about 200G , so will 4T hard disk be enough for read correction ? If not ,how much should I prepare for it ? Thank you .

moold commented 3 years ago

Depending on the repeat content of the genome. But, generally speaking, It should be enough.

longzhangnation commented 3 years ago

In additon , for my correction ,the software stopped for several times , and I restart running it , will it rerun from where it stop ? Can you give me an estimate time about the correction of my data , my setting is 4 parallel * 6 threads .

moold commented 3 years ago

YES. It will rerun from where it stop. I cannot estimate the time, depending on your config and genome characteristic.