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ODM2 / ODM2ControlledVocabularies

A Python/Django web application and REST API for managing the ODM2 Controlled Vocabularies, with SKOS and community moderation features.
http://vocabulary.odm2.org
BSD 3-Clause "New" or "Revised" License
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Map CUAHSI/ODM2 SpeciationCV terms to TaxonomicClassifier terms using ChEBI #38

Open aufdenkampe opened 5 years ago

aufdenkampe commented 5 years ago

As described in https://github.com/ODM2/ODM2/issues/161:

TaxonomicClassifiers for Chemistry (Chemical species) will include every entry in the current SpeciationCV, http://vocabulary.odm2.org/speciation/, which is also inadequate for many geochemical needs.

TaxonomicClassifiers for Chemistry will be taken from the Chemical Entities of Biological Interest (ChEBI) ontology, https://www.ebi.ac.uk/chebi/init.do, using their web services.

Need to map terms from current SpeciationCV to ChEBI IDs and names.

This would benefit from concurrently addressing #37.