issues
search
OmicsML
/
dance
DANCE: a deep learning library and benchmark platform for single-cell analysis
https://pydance.readthedocs.io
BSD 2-Clause "Simplified" License
344
stars
33
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
build(deps): bump opencv-python from 4.8.1.78 to 4.9.0.80
#414
dependabot[bot]
closed
6 months ago
1
build(deps): bump scanpy from 1.9.6 to 1.9.8
#413
dependabot[bot]
closed
6 months ago
1
update installation script and instruction to use newer versions libs
#412
RemyLau
closed
6 months ago
0
Complete wrapped functions
#411
xingzhongyu
closed
6 months ago
0
drop py38 support
#410
RemyLau
closed
7 months ago
0
build(deps): bump numba from 0.58.0 to 0.59.0
#409
dependabot[bot]
closed
7 months ago
2
implement several wrapped preprocessing functions from `sc.pp`
#408
xingzhongyu
closed
7 months ago
0
Random `segfault` when running pipeline tuning with `wandb` on certain machines
#407
RemyLau
opened
7 months ago
0
add examples for params tuning and custom preprocessing function registration
#406
RemyLau
closed
7 months ago
0
build(deps): bump tables from 3.9.1 to 3.9.2
#405
dependabot[bot]
closed
7 months ago
1
__init__.py missing from dance/metadata
#404
cwilson51
opened
7 months ago
0
build(deps): bump pandas from 1.5.3 to 2.2.0
#403
dependabot[bot]
closed
6 months ago
4
build(deps): bump scikit-misc from 0.3.0 to 0.3.1
#402
dependabot[bot]
closed
7 months ago
1
add_transform_test
#401
xingzhongyu
opened
7 months ago
4
build(deps): bump numpy from 1.25.2 to 1.26.3
#400
dependabot[bot]
closed
7 months ago
2
build(deps-dev): bump pytest-xdist from 3.3.1 to 3.5.0
#399
dependabot[bot]
closed
7 months ago
1
feat: pipeline tuning `wandb` integration
#398
RemyLau
closed
8 months ago
0
feat: implement ``PipelinePlaner``
#397
RemyLau
closed
8 months ago
0
build(deps): bump tifffile from 2023.7.10 to 2023.12.9
#396
dependabot[bot]
closed
8 months ago
1
feat: pipeline resolve
#395
RemyLau
closed
8 months ago
0
register datasets
#394
RemyLau
closed
8 months ago
0
register existing transforms
#393
RemyLau
closed
8 months ago
0
build(deps): bump scanpy from 1.9.5 to 1.9.6
#392
dependabot[bot]
closed
8 months ago
2
fix: `FilterGenesRegression` deprecated transpose and missed args; `ScTransformR` env config
#391
xingzhongyu
closed
8 months ago
0
feat: implement `config`, `registry`, and `pipeline`
#390
RemyLau
closed
8 months ago
0
fix: register `skip_count_check` attr for `FilterGenesRegression`
#389
xingzhongyu
closed
8 months ago
0
patchfix: disable windows lint test due to faulty windows img from github action
#388
RemyLau
closed
8 months ago
0
[pre-commit.ci] pre-commit autoupdate
#387
pre-commit-ci[bot]
closed
8 months ago
0
create CHANGELOG.md
#386
RemyLau
closed
8 months ago
0
add note about setting up scheduled jobs with crontab
#385
RemyLau
closed
8 months ago
0
Config support
#384
RemyLau
opened
8 months ago
0
[pre-commit.ci] pre-commit autoupdate
#383
pre-commit-ci[bot]
closed
8 months ago
0
build(deps-dev): bump pre-commit from 3.5.0 to 3.6.0
#382
dependabot[bot]
closed
8 months ago
3
build(deps): bump pandas from 1.5.3 to 2.1.4
#381
dependabot[bot]
closed
7 months ago
2
fix: align `obs_names` of mod2 to mod1 when necessary
#380
xingzhongyu
closed
8 months ago
0
hotfix: `FeatureFeatureGraph` consstruction and improve computation efficiency; minor fix for scmogcn example
#379
RemyLau
closed
8 months ago
0
Feature: sanity checks
#378
RemyLau
opened
9 months ago
0
bumpversion: 1.0.1 -> 1.1.0.dev
#377
RemyLau
closed
9 months ago
0
bumpversion: 1.0.1.dev -> 1.0.1
#376
RemyLau
closed
9 months ago
0
build(deps-dev): bump pytest from 7.4.2 to 7.4.3
#375
dependabot[bot]
closed
9 months ago
1
build(deps): bump scipy from 1.11.3 to 1.11.4
#374
dependabot[bot]
closed
9 months ago
1
fix: tests
#373
RemyLau
closed
9 months ago
0
fix: rtd config
#372
RemyLau
closed
9 months ago
0
DANCE V1.0.0 benchmark production
#371
RemyLau
closed
9 months ago
0
build(deps): bump igraph from 0.10.8 to 0.11.3
#370
dependabot[bot]
opened
9 months ago
7
build(deps): bump numpy from 1.25.2 to 1.26.2
#369
dependabot[bot]
closed
7 months ago
2
[pre-commit.ci] pre-commit autoupdate
#368
pre-commit-ci[bot]
closed
9 months ago
0
build(deps): bump scikit-learn from 1.3.1 to 1.3.2
#366
dependabot[bot]
closed
9 months ago
1
build(deps): bump networkx from 3.1 to 3.2.1
#365
dependabot[bot]
closed
9 months ago
2
build(deps): bump numba from 0.58.0 to 0.58.1
#364
dependabot[bot]
closed
7 months ago
2
Previous
Next