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OmicsML
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dance
DANCE: a deep learning library and benchmark platform for single-cell analysis
https://pydance.readthedocs.io
BSD 2-Clause "Simplified" License
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build(deps): bump networkx from 3.1 to 3.2
#363
dependabot[bot]
closed
10 months ago
1
build(deps): bump igraph from 0.10.8 to 0.11.2
#362
dependabot[bot]
closed
9 months ago
1
build(deps): bump numpy from 1.25.2 to 1.26.1
#361
dependabot[bot]
closed
10 months ago
1
build(deps): bump h5py from 3.9.0 to 3.10.0
#360
dependabot[bot]
closed
11 months ago
1
build(deps-dev): bump pre-commit from 3.4.0 to 3.5.0
#359
dependabot[bot]
closed
11 months ago
1
new datasets, additional preprocessing methods, and graph constructions
#358
xingzhongyu
closed
9 months ago
0
[pre-commit.ci] pre-commit autoupdate
#357
pre-commit-ci[bot]
closed
11 months ago
0
fix readme: conda activation; closes #354
#356
RemyLau
closed
11 months ago
0
build(deps): bump tables from 3.8.0 to 3.9.1
#355
dependabot[bot]
closed
11 months ago
1
Questions about conda installing
#354
HelloWorldLTY
closed
11 months ago
1
readme: action runner script with instruction
#353
RemyLau
closed
11 months ago
0
fix: remove pyro-ppl from direct deps to prevent install torch early
#352
RemyLau
closed
11 months ago
0
build(deps): bump numpy from 1.25.2 to 1.26.0
#351
dependabot[bot]
closed
11 months ago
2
build(deps): bump opencv-python from 4.8.0.76 to 4.8.1.78
#350
dependabot[bot]
closed
11 months ago
1
upgrade tox test; create lint workflow
#349
RemyLau
closed
11 months ago
0
build(deps): bump scipy from 1.11.2 to 1.11.3
#348
dependabot[bot]
closed
11 months ago
1
[pre-commit.ci] pre-commit autoupdate
#347
pre-commit-ci[bot]
closed
11 months ago
0
build(deps): bump scikit-learn from 1.3.0 to 1.3.1
#346
dependabot[bot]
closed
11 months ago
1
build(deps): bump numba from 0.57.1 to 0.58.0
#345
dependabot[bot]
closed
11 months ago
1
build(deps): bump pandas from 2.1.0 to 2.1.1
#344
dependabot[bot]
closed
11 months ago
1
[pre-commit.ci] pre-commit autoupdate
#343
pre-commit-ci[bot]
closed
11 months ago
0
build(deps): bump igraph from 0.10.6 to 0.10.8
#342
dependabot[bot]
closed
11 months ago
1
expfeat: implement anndata transform adaptor
#341
RemyLau
closed
11 months ago
0
build(deps-dev): bump tox from 4.11.1 to 4.11.3
#340
dependabot[bot]
closed
1 year ago
1
build(deps-dev): bump pytest from 7.4.1 to 7.4.2
#339
dependabot[bot]
closed
1 year ago
1
build(deps): bump scanpy from 1.9.4 to 1.9.5
#338
dependabot[bot]
closed
11 months ago
6
Preprocessing benchmarking
#337
xingzhongyu
closed
11 months ago
0
fix deprecated option
#336
RemyLau
closed
1 year ago
0
build(deps-dev): bump pytest from 7.4.0 to 7.4.1
#335
dependabot[bot]
closed
1 year ago
1
build(deps-dev): bump tox from 4.10.0 to 4.11.1
#334
dependabot[bot]
closed
1 year ago
2
build(deps-dev): bump pre-commit from 3.3.3 to 3.4.0
#333
dependabot[bot]
closed
1 year ago
1
build(deps): bump pandas from 2.0.3 to 2.1.0
#332
dependabot[bot]
closed
1 year ago
1
add 4 clustering datasets
#331
xingzhongyu
closed
1 year ago
1
[pre-commit.ci] pre-commit autoupdate
#330
pre-commit-ci[bot]
closed
1 year ago
0
build(deps): bump scanpy from 1.9.3 to 1.9.4
#329
dependabot[bot]
closed
1 year ago
1
add 5 datasets
#328
xingzhongyu
closed
1 year ago
0
build(deps-dev): bump tox from 4.9.0 to 4.10.0
#327
dependabot[bot]
closed
1 year ago
1
build(deps): bump sphinx-rtd-theme from 1.2.2 to 1.3.0
#326
dependabot[bot]
closed
1 year ago
1
pin lower version of scipy and scikit-mis version for python 3.8
#325
RemyLau
closed
1 year ago
0
build(deps): bump igraph from 0.10.1 to 0.10.6
#324
dependabot[bot]
closed
1 year ago
0
build(deps-dev): bump tox from 4.6.4 to 4.9.0
#323
dependabot[bot]
closed
1 year ago
1
build(deps): bump scipy from 1.11.1 to 1.11.2
#322
dependabot[bot]
closed
1 year ago
1
build(deps): bump tqdm from 4.65.0 to 4.66.1
#321
dependabot[bot]
closed
1 year ago
1
build(deps): bump opencv-python from 4.8.0.74 to 4.8.0.76
#320
dependabot[bot]
closed
1 year ago
1
build(deps-dev): bump tox from 4.6.4 to 4.8.0
#319
dependabot[bot]
closed
1 year ago
1
[pre-commit.ci] pre-commit autoupdate
#318
pre-commit-ci[bot]
closed
1 year ago
0
build(deps): bump pyro-ppl from 1.8.5 to 1.8.6
#317
dependabot[bot]
closed
1 year ago
1
build(deps): bump leidenalg from 0.10.0 to 0.10.1
#316
dependabot[bot]
closed
1 year ago
1
change python-igraph to igraph
#315
szhorvat
closed
1 year ago
1
build(deps): bump threadpoolctl from 3.1.0 to 3.2.0
#314
dependabot[bot]
closed
1 year ago
1
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