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OmicsML
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dance
DANCE: a deep learning library and benchmark platform for single-cell analysis
https://pydance.readthedocs.io
BSD 2-Clause "Simplified" License
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[pre-commit.ci] pre-commit autoupdate
#313
pre-commit-ci[bot]
closed
1 year ago
0
build(deps): bump scikit-misc from 0.2.0 to 0.3.0
#312
dependabot[bot]
closed
1 year ago
1
build(deps): bump torchnmf from 0.3.4 to 0.3.5
#311
dependabot[bot]
closed
1 year ago
1
build(deps-dev): bump tox from 4.6.3 to 4.6.4
#310
dependabot[bot]
closed
1 year ago
1
[pre-commit.ci] pre-commit autoupdate
#309
pre-commit-ci[bot]
closed
1 year ago
0
build(deps): bump leidenalg from 0.9.1 to 0.10.0
#308
dependabot[bot]
closed
1 year ago
1
build(deps): bump opencv-python from 4.7.0.72 to 4.8.0.74
#307
dependabot[bot]
closed
1 year ago
1
build(deps): bump scikit-learn from 1.2.2 to 1.3.0
#306
dependabot[bot]
closed
1 year ago
1
bump version: v1.0.0 -> v1.0.1-dev
#305
RemyLau
closed
1 year ago
0
build(deps): bump pandas from 2.0.2 to 2.0.3
#304
dependabot[bot]
closed
1 year ago
1
build(deps): bump scipy from 1.10.1 to 1.11.1
#303
dependabot[bot]
closed
1 year ago
1
release v1.0.0
#302
RemyLau
closed
1 year ago
0
fix typo in function name
#301
RemyLau
closed
1 year ago
0
link to tutorial repo
#300
RemyLau
closed
1 year ago
0
implement `gex2adt_subset` for modality prediction and matching tasks
#299
RemyLau
closed
1 year ago
0
refactor multi dataset object for joint embedding tasks
#298
RemyLau
closed
1 year ago
0
hotfix: add additional channels depending on the input data type
#297
RemyLau
closed
1 year ago
0
refactor multi dataset object for matching modality tasks
#296
RemyLau
closed
1 year ago
0
fix dataset class attr name: `DATASETS` -> `AVAILABLE_DATA`
#295
RemyLau
closed
1 year ago
0
build(deps): bump sphinx from 6.2.1 to 7.0.1
#294
dependabot[bot]
closed
1 year ago
2
build(deps): bump sphinx-autodoc-typehints from 1.23.0 to 1.23.2
#293
dependabot[bot]
closed
1 year ago
2
update datasets doc struct and fix torchvision dep
#292
RemyLau
closed
1 year ago
0
build(deps-dev): bump pytest-subtests from 0.10.0 to 0.11.0
#291
dependabot[bot]
closed
1 year ago
1
build(deps): bump numba from 0.57.0 to 0.57.1
#290
dependabot[bot]
closed
1 year ago
1
build(deps): bump h5py from 3.8.0 to 3.9.0
#289
dependabot[bot]
closed
1 year ago
1
build(deps-dev): bump pytest from 7.3.2 to 7.4.0
#288
dependabot[bot]
closed
1 year ago
1
build(deps): bump pandas from 2.0.1 to 2.0.2
#287
dependabot[bot]
closed
1 year ago
1
add __version__
#286
RemyLau
closed
1 year ago
0
standardize `AVAILABLE_DATA` to list of strings or dicts
#285
RemyLau
closed
1 year ago
0
refactor multi dataset object for predict modality tasks
#284
RemyLau
closed
1 year ago
0
clean up multi dataset objects
#283
RemyLau
closed
1 year ago
0
expose main properties of anndata (or mudata) to base dance data
#282
RemyLau
closed
1 year ago
0
build(deps-dev): bump tox from 4.6.0 to 4.6.3
#281
dependabot[bot]
closed
1 year ago
1
[pre-commit.ci] pre-commit autoupdate
#280
pre-commit-ci[bot]
closed
1 year ago
0
build(deps-dev): bump pytest from 7.3.1 to 7.3.2
#279
dependabot[bot]
closed
1 year ago
1
build(deps): bump mudata from 0.2.2 to 0.2.3
#278
dependabot[bot]
closed
1 year ago
1
build(deps-dev): bump pre-commit from 3.3.2 to 3.3.3
#277
dependabot[bot]
closed
1 year ago
1
build(deps): bump pyro-ppl from 1.8.4 to 1.8.5
#276
dependabot[bot]
closed
1 year ago
1
build(deps-dev): bump tox from 4.6.0 to 4.6.2
#275
dependabot[bot]
closed
1 year ago
1
change get_available_data to class method
#274
RemyLau
closed
1 year ago
0
add dataset availability check function
#273
RemyLau
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#272
pre-commit-ci[bot]
closed
1 year ago
0
build(deps-dev): bump tox from 4.5.1 to 4.6.0
#271
dependabot[bot]
closed
1 year ago
1
build(deps): bump requests from 2.30.0 to 2.31.0
#270
dependabot[bot]
closed
1 year ago
1
build(deps): bump numba from 0.56.2 to 0.57.0
#269
dependabot[bot]
closed
1 year ago
1
build(deps-dev): bump tox from 4.5.1 to 4.5.2
#268
dependabot[bot]
closed
1 year ago
1
build(deps-dev): bump pre-commit from 3.2.2 to 3.3.2
#267
dependabot[bot]
closed
1 year ago
1
build(deps-dev): bump pytest-xdist from 3.2.1 to 3.3.1
#266
dependabot[bot]
closed
1 year ago
1
imputation module refactor and fixes
#265
RemyLau
closed
1 year ago
1
build(deps): bump statsmodels from 0.13.5 to 0.14.0
#264
dependabot[bot]
closed
1 year ago
0
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