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Open-Systems-Pharmacology
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OSPSuite.ParameterIdentification
R package for parameter identification for OSPS models
http://www.open-systems-pharmacology.org/OSPSuite.ParameterIdentification/
GNU General Public License v2.0
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`plotOFVProfiles()` fails in the vignette example
#91
PavelBal
opened
7 months ago
4
Compare error values between R and MoBi in the vignette Aciclovir example
#90
PavelBal
opened
7 months ago
0
Specify unified output of the optimization run.
#89
PavelBal
opened
7 months ago
1
`PIOutputMapping` add check for supported scaling
#88
PavelBal
closed
7 months ago
1
Error when trying to add observed data defined in mass concentration to `PIOutputMapping` with output in molar concentration
#87
PavelBal
opened
7 months ago
0
Re-write readme
#86
PavelBal
closed
7 months ago
0
Documentation - vignette on error (objective) function
#85
PavelBal
closed
7 months ago
0
`PIConfiguration`: uncomment `simulateSteadyState` and `steadyStateTime` once steady-state is enabled
#84
PavelBal
opened
7 months ago
1
Use setOutputs
#83
PavelBal
closed
8 months ago
0
Add description of `transformResultsFunction` to the vignette.
#82
PavelBal
opened
9 months ago
0
Create separate enums for the different algorithms options
#81
PavelBal
closed
7 months ago
2
Rename `PIConfiguration:targetFunction` to `objectiveFunction`
#80
PavelBal
closed
7 months ago
3
Example files are note included in the package
#79
Felixmil
closed
7 months ago
0
Grid and profile functions
#78
svavil
closed
10 months ago
3
Hessian fixes
#77
svavil
closed
11 months ago
1
Make calculation of Hessian more robust
#76
PavelBal
closed
11 months ago
0
Selected algos
#75
PavelBal
closed
11 months ago
1
Passing controls to `DEoptim`
#74
PavelBal
closed
11 months ago
1
Check if simulations are executed in parallel
#73
PavelBal
opened
11 months ago
0
Merging latest develop updates
#72
svavil
closed
11 months ago
0
Aciclovir and midazolam examples
#71
svavil
closed
11 months ago
0
Return a `modCost`-like structure with Inf residuals when a simulatio…
#70
svavil
closed
11 months ago
0
Remove `{grDevices}` from `Imports`
#69
Felixmil
closed
7 months ago
0
Error message when creating a PI with data mapping without observed data
#68
PavelBal
opened
1 year ago
0
Calculation of hessian correct?
#67
PavelBal
closed
1 year ago
3
Return a `modCost`-like structure with Inf residuals when a simulatio…
#66
PavelBal
closed
1 year ago
3
Objective function - error
#65
PavelBal
closed
2 months ago
1
Objective function - weights
#64
PavelBal
closed
2 months ago
1
Objective function - return Inf when a simulation is not successfull
#63
PavelBal
closed
7 months ago
1
DataCombined objects created at ParameterIdentification task initialization
#62
svavil
closed
7 months ago
2
Aciclovir and midazolam examples
#61
svavil
closed
11 months ago
1
Fix only censored
#60
PavelBal
closed
1 year ago
0
Revert "Merge data combined in output mappings"
#59
svavil
closed
1 year ago
1
Merge data combined in output mappings
#58
PavelBal
closed
1 year ago
1
Added two R-based Levenberg-Marquardt implementations, one can be con…
#57
svavil
closed
1 year ago
0
Algorithm selection
#56
svavil
closed
1 year ago
0
Algorithm selection
#55
PavelBal
closed
11 months ago
4
Mod cost fix
#54
PavelBal
closed
1 year ago
1
Objective function implemented internally
#53
PavelBal
closed
1 year ago
1
Refactor `ParameterIdentification$.targetFunctio()`
#52
PavelBal
closed
7 months ago
2
`modCost()` fails with only one data point
#51
PavelBal
closed
1 year ago
0
Implement `FME::modCost()` internally
#50
PavelBal
closed
1 year ago
0
Actually showing the message of the error and not breaking with this …
#49
PavelBal
closed
1 year ago
2
Vignette
#48
svavil
closed
7 months ago
7
Update README.md
#47
PavelBal
closed
1 year ago
0
Enable steady-state simulation
#46
PavelBal
opened
1 year ago
2
Add spellcheck
#45
PavelBal
opened
1 year ago
0
Add MLE estimation as an optional way to calculate target function
#44
PavelBal
opened
1 year ago
1
PIOutputMapping - set transformations for simulation quantity.
#43
PavelBal
opened
1 year ago
0
ParameterIdentification - .applyFinalValues should be optional.
#42
PavelBal
opened
1 year ago
0
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