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OpenOmics
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metamorph
Metagenomics and Metatranscriptomics pipeline
https://openomics.github.io/metamorph/
MIT License
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Specify snakemake re-run triggers
#19
eameyer
opened
2 weeks ago
1
Update spades
#18
rroutsong
closed
3 weeks ago
0
Debug assembly step
#17
rroutsong
closed
1 month ago
0
Finish rna pipeline
#16
rroutsong
closed
2 months ago
0
Add biobakery docker
#15
rroutsong
closed
3 months ago
0
Mags and after rules
#14
rroutsong
closed
3 months ago
0
Remove references to the --coa option from run sub command help message
#13
skchronicles
opened
4 months ago
0
Allow for mouse host in host read removal
#12
rroutsong
opened
4 months ago
0
Add rna inputs workflow
#11
rroutsong
closed
4 months ago
0
Consolidate and derep bins
#10
rroutsong
closed
5 months ago
0
Allow for RNA co assembly portion of the pipeline
#9
rroutsong
closed
1 week ago
1
Adding metawrap workflow up to bin refinement
#8
rroutsong
closed
9 months ago
0
Metawrap 1.3.2 + singularity
#7
rroutsong
closed
10 months ago
0
Add in coassembly feature.
#6
rroutsong
closed
4 months ago
2
Metawrap workflow through genome assembly (per-sample)
#5
rroutsong
closed
10 months ago
0
Install metawrap
#4
rroutsong
closed
10 months ago
1
Build dockerfile and components for containerized workflow
#3
rroutsong
closed
11 months ago
1
Create a new entry point for pipeline
#2
skchronicles
closed
2 years ago
1
Create basic scaffold for project
#1
skchronicles
closed
2 years ago
0