OpenTreeOfLife hackathon issues

OpenTreeOfLife / hackathon

A repo for the 2014 OpenTree / Arbor / HIP hackathon

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issues

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Submission(s) to the 16th Annual Bioinformatics Open Source Conference (BOSC 2015)

#29 hlapp opened 9 years ago
0
Python library to seamlessly work with OTL data: from OTL to full tree models

#28 jeetsukumaran opened 10 years ago
5
peyotl, status of; and Open Tree of Life APIs

#27 karolisr closed 5 years ago
4
getSyntheticTree params for whole tree?

#26 mjy opened 10 years ago
7
Pipeline for reconciling branch lengths with a reference timetree in Arbor

#25 uyedaj opened 10 years ago
1
Educational resource and awareness program on Phyloinformatics

#24 pandurang-kolekar opened 10 years ago
2
"One-click" instantiation of OT, or virtual machine with OT loaded?

#23 mjy opened 10 years ago
6
Topology matcher?

#22 mjy opened 10 years ago
10
One line translation from OT to figure in FigTree or similar

#21 mjy opened 10 years ago
11
Documented OpenTOL web service API in NAR annual WS issue

#20 rvosa opened 10 years ago
3
Pipeline for customized phylogeny based on user provided gene/protein sequence(s) using Open Tree of Life data

#19 pandurang-kolekar opened 10 years ago
10
Taxonomic names from CSV/TSV -> OpenTree OTUs -> Tree -> NeXML

#18 gaurav closed 10 years ago
3
The return of PhyloStyloTastic

#17 gaurav opened 10 years ago
7
From a list of species, return phylogeny (from OpenTree) and geographical records (from GBIF)

#16 fmichonneau opened 10 years ago
4
implement a service to sample from a named taxon

#15 arlin opened 10 years ago
4
An rOpenSci library for the Open Tree of Life API.

#14 dwinter opened 10 years ago
15
Integrate OpenTree with Interaction Webs

#13 bobthacker opened 10 years ago
10
Extract empirical tree data sets over simulated tree data set with specified parameters

#12 pandurang-kolekar opened 10 years ago
2
Extract divergence time estimates given species/genera/family and viceversa

#11 dilrinidesilva opened 10 years ago
3
Integrate Open tree of life with species delimitation model.

#10 maribetg opened 10 years ago
3
Integrate Global Biotic Interactions with OpenTree

#9 jhpoelen closed 10 years ago
4
Genome alterations on trees

#8 jvamosi opened 10 years ago
4
The full Call for Participation as a Markdown-formatted text document

#7 hlapp closed 10 years ago
0
Create a mobile device app for the Open Tree of Life

#6 hlapp opened 10 years ago
10
Extract subtrees from a time slice

#5 Caetanods opened 10 years ago
1
Extract random trees

#4 msrosenberg opened 10 years ago
1
Build OT access into Bio* toolboxes and other widely used platforms

#3 arlin opened 10 years ago
3
Obtain a tree for comparative analysis for the taxa in a given datafile

#2 bsidlauskas opened 10 years ago
10
Extracting Subtree from OpenTree

#1 mwestneat opened 10 years ago
5