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OpenTreeOfLife
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phylesystem-api
API access to Open Tree of Life treestore
BSD 2-Clause "Simplified" License
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Should outsiders care about NexSON?
#215
rvosa
closed
5 years ago
4
Correct (and clarify) tree-exclusion logic
#214
jimallman
closed
7 years ago
0
Manage (include or exclude) trees in synth
#213
jimallman
closed
7 years ago
0
add otindex URL as variable
#212
kcranston
closed
7 years ago
0
Update URLs for (un)indexing studies in oti.
#211
jimallman
closed
7 years ago
0
Trees in synth method
#210
mtholder
closed
7 years ago
0
Unexpected values for branchLength* for trees with no branch lengths
#209
josephwb
opened
7 years ago
0
Nudge otindex
#208
kcranston
closed
7 years ago
0
service to return set of trees included in the synthesis collections
#207
kcranston
opened
7 years ago
3
double check api behavior when getting just mapped tips
#206
mtholder
opened
7 years ago
0
get ready for new otindex add / update / remove study methods
#205
kcranston
opened
7 years ago
0
Merge import from post
#204
mtholder
closed
7 years ago
3
problems testing locally
#203
snacktavish
closed
5 years ago
12
test_external_url.py is failing
#202
jar398
opened
7 years ago
1
hmm. need some hacks to support the version namespaced and bare forms of the external_url
#201
mtholder
closed
7 years ago
0
Preserve helpful responses in cache
#200
jimallman
opened
7 years ago
0
Issue 116
#199
mtholder
closed
7 years ago
0
pushing to collections-0 to GitHub from devapi is currently failing due to a deploy key problem.
#198
mtholder
closed
7 years ago
2
Collections store
#197
mtholder
closed
7 years ago
0
Remove dup test harness
#196
mtholder
closed
7 years ago
1
Peyotl cleanup
#195
mtholder
closed
7 years ago
1
Reduce dependence on conf files.
#194
mtholder
closed
7 years ago
0
Structured way to make 'out of band' changes to phylesystem
#193
jar398
opened
7 years ago
0
Force DOIs to URL form for taxonomic amendments.
#192
jimallman
closed
7 years ago
4
NexSON syntax for tree synthesis status
#191
kcranston
opened
7 years ago
22
Need a method that reserves a range of ids without writing an amendments file
#190
jar398
opened
7 years ago
0
URLs for amendment service methods
#189
jar398
opened
8 years ago
2
Add /v3/amendments/amendment_list
#188
jimallman
closed
8 years ago
0
synchronize run_tests.sh and opentreetesting.py with germinator repo
#187
jar398
closed
8 years ago
0
Should get the NHX info into the nexson in some way
#186
mtholder
opened
8 years ago
2
Should add an "Add non-nexson tree to study" API function
#185
mtholder
opened
8 years ago
0
should migrate import from non-NEXUS formats to phylesystem-api
#184
mtholder
opened
8 years ago
0
Add amendment ws-tests
#183
jimallman
closed
8 years ago
0
Status 200 where 404 is required
#182
jar398
closed
7 years ago
3
Add support for amendments
#181
jimallman
closed
8 years ago
0
Subtree method with nexson doesn't work
#180
josephwb
opened
8 years ago
3
V3
#179
jimallman
closed
8 years ago
0
Cache study list (reviving old branch)
#178
jimallman
closed
8 years ago
0
Fix and simplify api urls
#177
jimallman
closed
8 years ago
6
Update code to support host-only API base URLs
#176
jimallman
opened
8 years ago
2
we need a few special case collection edit methods
#175
mtholder
opened
8 years ago
10
Web service to sync server's repo with github's repo
#174
jar398
opened
8 years ago
3
Update/migrate detailed api docs
#173
snacktavish
opened
8 years ago
0
Fix URL for nexson documentation
#172
jar398
opened
8 years ago
0
Conditional retrieval of study nexson
#171
jar398
opened
8 years ago
0
Change default API scheme to HTTPS
#170
jimallman
closed
8 years ago
2
Failing fetch for duplicate-study test
#169
jimallman
opened
8 years ago
4
Treat incoming Markdown as a named argument.
#168
jimallman
closed
8 years ago
1
fix the translate=true feature
#167
jar398
closed
8 years ago
0
maybe a bit less logging
#166
jar398
opened
8 years ago
0
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