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PNNL-CompBio
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BeatAMLproteomics
Analysis of the 210 patient cohort processed by the OHSU/PNNL PTRC
MIT License
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Added relaxed phospho correction script
#21
CamiloPosso
closed
2 years ago
0
Fig 2- Compute differential expression of various genetic signatures
#20
sgosline
closed
2 years ago
4
Gene mutation heatmap of most common mutations
#19
sgosline
closed
2 years ago
1
Create circos plot describing data
#18
sgosline
closed
2 years ago
1
Fixed typo in erk1 and fixed small bug in chunk
#17
CamiloPosso
closed
2 years ago
0
Finished updating fig1 to work with 210 data
#16
CamiloPosso
closed
2 years ago
0
Added combined data loading function.
#15
CamiloPosso
closed
3 years ago
0
Updated loading_data.R
#14
CamiloPosso
closed
3 years ago
0
Re-create Figure 1 plots with new data
#13
sgosline
closed
2 years ago
1
Re-filter drug sensitivity data to determine numbers
#12
sgosline
closed
2 years ago
1
Added RNA and WES upload to synapse and loading scripts
#11
CamiloPosso
closed
3 years ago
1
Pilot models added & .gitignore updated
#10
VincentDanna
closed
3 years ago
0
Added loading script and summary figures script
#9
CamiloPosso
closed
3 years ago
0
Build straw-person model of drug response and asses performance from pilot MDs
#8
sgosline
closed
2 years ago
0
Create data summary MD of the data once loaded
#7
sgosline
closed
3 years ago
2
Create file to download all beatAML data into memory
#6
sgosline
closed
3 years ago
1
Improvements to functional analysis
#5
mdnestor
closed
3 years ago
0
Updates to functional analysis
#4
mdnestor
closed
3 years ago
0
Use `leapR` to identify pathways that are correlated across patients
#3
sgosline
closed
2 years ago
0
Synapse convert files to tables
#2
mdnestor
closed
3 years ago
0
Added ex10 proteomics + data processing scripts
#1
mdnestor
closed
3 years ago
0
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