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PROBIC
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mGEMS
mGEMS Genomic epidemiology with mixed samples
MIT License
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Bump actions/download-artifact from 2 to 4.1.7
#26
tmaklin
closed
2 months ago
0
Refactor input reading
#25
tmaklin
closed
3 months ago
0
Add precompiled macOS arm64 binaries
#24
tmaklin
closed
5 months ago
0
Update build pipeline and dependencies.
#23
tmaklin
closed
5 months ago
0
Add GitHub actions workflow for building the precompiled binaries
#22
tmaklin
closed
5 months ago
0
Improve `mGEMS extract`
#21
tmaklin
opened
1 year ago
0
Add installation instructions for conda installation
#20
tmaklin
closed
1 year ago
0
mGEMS-v1.3.0 (1 February 2023)
#19
tmaklin
closed
1 year ago
0
`Error: stoul exiting` if input pseudoalignments from paired reads have unequal numbers of reads
#18
tmaklin
closed
1 year ago
1
`Error: stold exiting` if input file(s) are compressed with unsupported compression type
#17
tmaklin
opened
2 years ago
1
Support Themisto v2.0.0 and newer
#16
tmaklin
closed
3 years ago
0
mGEMS-v1.1.0 (20 October 2021)
#15
tmaklin
closed
3 years ago
0
Improve usage documentation
#14
tmaklin
opened
3 years ago
0
Add option to exclude multi-group reads
#13
tmaklin
closed
3 years ago
1
Create a conda recipe for easy installation
#12
tmaklin
closed
1 year ago
1
Add option to write unassigned reads
#11
tmaklin
closed
3 years ago
1
Add option to write the raw read assignments to reference groups table
#10
tmaklin
closed
3 years ago
1
`Error: basic_string` when using mSWEEP abundances with bootstrap iterations in them as input
#9
tmaklin
closed
3 years ago
1
Documentation & input filter
#8
tmaklin
closed
4 years ago
0
Filter mSWEEP input
#7
gtonkinhill
closed
4 years ago
2
Add kallisto support
#6
tmaklin
closed
3 years ago
1
mGEMS-v0.2.0 (8 March 2020)
#5
tmaklin
closed
4 years ago
0
Create the 'mGEMS' executable
#4
tmaklin
closed
4 years ago
3
Incorporate the steps performed with shell commands
#3
tmaklin
closed
4 years ago
1
Create better error messages
#2
tmaklin
closed
4 years ago
1
Support reading Themisto files in directly
#1
tmaklin
closed
4 years ago
1