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PacificBiosciences
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pb-CpG-tools
Collection of tools for the analysis of CpG data
BSD 3-Clause Clear License
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bug fix in cg_sites_from_fasta()
#21
dportik
closed
2 years ago
0
cg_sites_dict UnboundLocalError
#20
sunkelb
closed
2 years ago
3
Need deduplication for aligned BAM ?
#19
hmyh1202
closed
2 years ago
1
How to Select pileup_mode ?
#18
hmyh1202
closed
2 years ago
1
modification probability
#17
yuntwang
closed
2 years ago
1
Transfer MM and ML tags from one BAM file to another?
#16
elcortegano
closed
2 years ago
2
Program stalled/zombified
#15
oushujun
closed
2 years ago
7
Demo switch to tflite model for pileup script
#14
ctsa
closed
1 year ago
0
Improve exception messages
#13
ctsa
closed
2 years ago
0
how do I know If haplotype information is present?
#12
Raysun61
closed
2 years ago
4
Make bed file for reads processed by primrose
#11
oushujun
opened
2 years ago
8
FASTA and BED file contig names do not match error
#10
rashidalabri
closed
2 years ago
2
Exception in thread Thread-4
#9
yuntwang
closed
2 years ago
12
primrose need HiFi kinetics
#8
hmyh1202
closed
2 years ago
1
strand information on the output bed file
#7
hrrsjeong
closed
2 years ago
1
file has no sequences defined (mode='rb') - is it SAM/BAM format?
#6
jdakota1305
closed
2 years ago
1
Accelerate bam record scan and basemod processing
#5
ctsa
closed
2 years ago
2
added consensus by haplotype feature
#4
dportik
closed
2 years ago
0
output sites based on pileup consensus seq
#3
dportik
closed
2 years ago
0
Feature/transform model
#2
dportik
closed
2 years ago
0
model-based pileup %methylation is independent of the number of reads
#1
rhallPB
closed
2 years ago
2
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