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Parsoa
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SVDSS
Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)
MIT License
42
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SVDSS2 output nothing
#34
coopsor
closed
1 month ago
4
Seg default
#33
Flooooooooooooower
opened
1 month ago
4
Update version string
#32
Krannich479
closed
2 months ago
0
Update README.md
#31
Krannich479
closed
4 months ago
1
SVDSS call no output
#30
jiadong324
opened
10 months ago
6
empty SFS with smoothed bam file
#29
lixiang117423
closed
10 months ago
12
Question on Input Support for FASTA Input for SFS Search
#28
LeoHongboWANG
opened
1 year ago
1
SVDSS2-alpha
#27
ldenti
closed
1 year ago
0
premature Genotyper class; compile unit functional under C++11
#26
Krannich479
closed
1 year ago
0
Question about SFS extraction
#25
LYC-vio
closed
1 year ago
2
Segmentation fault while calling SV using --clipped option (v1.0.5)
#24
arnav26
closed
1 year ago
3
Run time estimation?
#23
LYC-vio
opened
1 year ago
4
-a does not work, have to use --append
#22
LYC-vio
closed
1 year ago
1
Segmentation fault while searching SFS between two assemblies
#21
LYC-vio
opened
1 year ago
4
Applicable to ONT nanopore long reads?
#20
stat-lab
opened
1 year ago
8
Why the detected SV types are only INS and DEL
#19
kuangzhuoran
closed
1 year ago
2
Some improvements
#18
ldenti
closed
1 year ago
0
How to prepare a BAM file
#17
kuangzhuoran
opened
1 year ago
3
CIGAR and query sequence lengths differ for reads in smoothed.selective.bam
#16
kfletcher88
opened
1 year ago
6
About Extend Tier 2
#15
songbowang125
closed
1 year ago
4
Segmentation fault (core dumped) error on v1.0.4
#14
nirvana693
opened
1 year ago
5
Updates abpoa
#13
ldenti
closed
2 years ago
0
Segmentation fault
#12
shaze
closed
2 years ago
6
Feature request: version information
#11
shaze
closed
2 years ago
2
Empty reads and sfs file
#10
mnshgl0110
opened
2 years ago
10
Adds compilation via cmake
#9
ldenti
closed
2 years ago
0
Update README.md
#8
rchikhi
closed
2 years ago
0
Update README.md
#7
rchikhi
closed
2 years ago
0
Uses kseq to parse reference fasta
#6
ldenti
closed
3 years ago
0
Minor (bugs?) fixes
#5
ldenti
closed
3 years ago
1
detecting SFSs from short-read unitigs
#4
dcopetti
opened
3 years ago
4
specific string to the identifiers output for aggregate
#3
jo-mc
closed
2 years ago
2
error when running the program without any parameter
#2
rchikhi
closed
3 years ago
0
Fixes bug in overlapping mode (we don't want 1bp overlaps)
#1
ldenti
closed
4 years ago
0