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PaulingLiu / ROGUE

Assessing the purity of single cell population
BSD 3-Clause "New" or "Revised" License
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Rogue for scATAC? #5

Closed paulasoler closed 3 years ago

paulasoler commented 3 years ago

Hello @PaulingLiu !

Thank you very much for your useful tool.

Could we apply this entropy-based metric for assessing the purity using data from scATAC-seq?

PaulingLiu commented 3 years ago

Hi @paulasoler, thanks for your interest. We have not tested how this approach perform on scATAC-seq, but maybe you can modify the code to do such analysis.