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PerkLab / SlicerFreeSurfer

This repository contains the SlicerFreeSurferImporter extension for 3D Slicer. The extension implements a module for importing models, scalar overlays, and segmentations from FreeSurfer, as well as handling the transformation of models from FreeSurfer to Slicer coordinates.
BSD 3-Clause "New" or "Revised" License
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3d-slicer-extension

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SlicerFreeSurfer

This repository contains the SlicerFreeSurfer extension for 3D Slicer. The extension implements a module for importing models, scalar overlays, and segmentations from FreeSurfer, as well as handling the transformation of models from FreeSurfer to Slicer coordinates.

Screenshot of SlicerFreeSurfer extension

Tutorials

Tutorials can be found in the wiki: https://github.com/PerkLab/SlicerFreeSurfer/wiki/Tutorials

Resources

Sample data: https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Data

FreeSurfer homepage: https://surfer.nmr.mgh.harvard.edu/