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PharmGKB
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PharmCAT
The Pharmacogenomic Clinical Annotation Tool
Mozilla Public License 2.0
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Enhance preprocessor performance
#141
anh151
closed
2 weeks ago
6
Add PharmCAT Docker image to GCR/Artifact Repository
#140
markwoon
opened
1 year ago
0
PharmCAT Bug in parsing multiallelic variants
#139
anh151
closed
1 year ago
5
Does PharmCAT upload user data somewhere?
#138
KraftRicardo
closed
1 year ago
1
Uniallelic_vcf file generation
#137
dineshpeace
closed
1 year ago
6
Issue with pharmcat_vcf_preprocessor.py
#136
joseMorosoli
closed
1 year ago
3
Discarded position in Pharmcat report
#135
krukanna
closed
12 months ago
3
preprocessor loses phaseblock info for multi-allelic variant position
#134
jrharting
closed
11 months ago
7
WSL2 Pharmcat Installation
#133
DineshRavindraRaju
closed
1 year ago
5
PDF Support
#132
markwoon
opened
1 year ago
2
Inconsistent report names?
#131
KraftRicardo
closed
1 year ago
1
Problem at table formatting in example file
#130
KraftRicardo
closed
1 year ago
2
pdf support?
#129
KraftRicardo
closed
1 year ago
8
Discarded genotype at some positions
#128
krukanna
closed
1 year ago
33
Dead link on website
#127
KraftRicardo
closed
1 year ago
2
Wrong recommendation from CPIC for capecitabine and fluorouracil
#126
krukanna
closed
1 year ago
3
fix(docker): sanitize ownership of reference FASTA files
#125
kuanyili
closed
1 year ago
2
Cannot use Named Allele Matcher 201 feature correctly
#124
amanpruthi15
closed
1 year ago
1
build(deps): bump activesupport from 7.0.3 to 7.0.4.1 in /docs
#123
dependabot[bot]
closed
1 year ago
1
Phenotyper json
#122
krukanna
closed
1 year ago
1
build(deps): bump nokogiri from 1.13.9 to 1.13.10 in /docs
#121
dependabot[bot]
closed
1 year ago
1
Possible bug in PharmCAT version 2.0.3 DPYD implementation
#120
anh151
closed
1 year ago
2
PharmCAT rare error using version 2.0.3
#119
anh151
closed
1 year ago
3
Preprocessor 2.0.3 - error and Pharmcat 2.0.3 output.
#118
Pharmacogenetecist
closed
1 year ago
3
VCF preprocessor TypeError "can only join an iterable"
#117
flaviahodel
closed
1 year ago
1
Question about VCF error and Help with preprocessor error
#116
Pharmacogenetecist
closed
1 year ago
17
Minor bugs in 2.0.0 release and improvement suggestions
#115
anh151
closed
1 year ago
7
build(deps): bump nokogiri from 1.13.6 to 1.13.9 in /docs
#114
dependabot[bot]
closed
1 year ago
1
Wrong default base filename with an outside call file
#113
BinglanLi
closed
1 year ago
1
Update warfarin workflow to include CYP4F2
#112
markwoon
opened
1 year ago
4
PharmCAT returning rsid for diplotype calls in SLCO1B1
#111
anh151
closed
1 year ago
1
Unable to build docker image
#110
Bioinf-usr
closed
1 year ago
1
CYP2D6 gene representation
#109
krukanna
closed
2 years ago
2
Technical question: necessary steps for adding genes
#108
ajpar94
closed
2 years ago
4
Harmonizing the VCF preprocessor arguments with the PharmCAT's
#107
BinglanLi
closed
2 years ago
0
Wrong representation for a CYP2D6 insertion
#106
BinglanLi
opened
2 years ago
0
build(deps-dev): bump semantic-release from 19.0.2 to 19.0.3
#105
dependabot[bot]
closed
1 year ago
1
build(deps): bump semver-regex from 3.1.3 to 3.1.4
#104
dependabot[bot]
closed
1 year ago
2
build(deps): bump npm from 8.5.5 to 8.12.0
#103
dependabot[bot]
closed
1 year ago
1
Preprocessor --missing_to_ref argument incorrect phasing
#102
anh151
closed
1 year ago
5
build(deps): bump minimist from 1.2.5 to 1.2.6
#101
dependabot[bot]
closed
2 years ago
1
Enhance VCF preprocessor warning messages
#100
BinglanLi
closed
11 months ago
1
Fixes typo
#99
pjvolders
closed
2 years ago
1
Fixes an issue with *.missing_pgx_var.vcf file
#98
pjvolders
closed
2 years ago
1
VCF preprocessor not working in docker
#97
pjvolders
closed
1 year ago
4
How to use Astrolabe's output and pipe it into PharmCAT?
#96
joseph-yclam
closed
1 year ago
4
Sort and arrange PGx variants in front of the non-PGx variants at the same genomic positions
#95
BinglanLi
closed
2 years ago
0
Preprocessor fails
#94
KarlKeat
closed
2 years ago
2
Flag duplicate VCF entries
#93
BinglanLi
opened
2 years ago
0
partial and combination allele calls
#92
katrinsangkuhl
closed
2 years ago
1
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