The HELM ambiguity design document includes the ability to annotate a bond. The editor accepts the notation, but does not display the information or allow the user to enter it.
For example the following HELM
CHEM1{[Az]}|PEPTIDE1{A.A.A.A.A.C.D.D.D.E.E.E.E}$PEPTIDE1,CHEM1,C:R3-1:R1"Specific Conjugation"$$$V2.0
Looks like this
and the bond attributes box does not include a section for annotations.
The HELM ambiguity design document includes the ability to annotate a bond. The editor accepts the notation, but does not display the information or allow the user to enter it.
For example the following HELM
CHEM1{[Az]}|PEPTIDE1{A.A.A.A.A.C.D.D.D.E.E.E.E}$PEPTIDE1,CHEM1,C:R3-1:R1"Specific Conjugation"$$$V2.0
Looks like this and the bond attributes box does not include a section for annotations.