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Porthmeus / MeMoMe

Metabolic Model Merging - a semiautomated way to merge genome scale metabolic models
Apache License 2.0
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Scrape through BIGG and extract metabolites formula and charges #12

Closed Unaimend closed 1 year ago

Unaimend commented 1 year ago

curl 'http://bigg.ucsd.edu/api/v2/universal/metabolites/g3p'

for all models, and extract the formula and charge and save it into a table

Unaimend commented 1 year ago
Porthmeus commented 1 year ago

Should we use the mergem code here? https://github.com/lobolab/mergem/blob/main/mergem/__database_id_merger.py

DafniGi commented 1 year ago

Check out #38

Porthmeus commented 1 year ago

will be closed by #38