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RENCI
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ninjato
Web-based segmentation tool for 3D tissue cleared microscopy images of nuclei.
MIT License
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Submitted assignments still showing active
#227
JustKeepClimbing
closed
1 year ago
2
224 show whole volume on top
#226
hyi
closed
1 year ago
0
Feature/dice score
#225
davidborland
closed
1 year ago
0
Show full volume at top of list of assignments in girder
#224
davidborland
closed
1 year ago
1
bugfix to account for approved assignment
#223
hyi
closed
1 year ago
0
return empty list if training volume does not exist
#222
hyi
closed
1 year ago
0
Feature/integrate available reviews
#221
davidborland
closed
1 year ago
1
added request_review_assignment parameter to request_assignment endpoint
#220
hyi
closed
1 year ago
0
several bug fixes
#219
hyi
closed
1 year ago
0
Bugfix/overwrite on refresh
#218
davidborland
closed
1 year ago
1
Move completed sent-back assignments to open review queue
#217
hyi
closed
1 year ago
0
Find subvolume by id for getting available assignments
#216
davidborland
closed
1 year ago
0
Feature/training
#215
davidborland
closed
1 year ago
0
Feature/add training
#214
hyi
closed
1 year ago
0
Feature/z snap
#213
davidborland
closed
1 year ago
1
Overwriting already completed (verified) mask
#212
JustKeepClimbing
closed
1 year ago
1
Shared nuclei border verification check
#211
JustKeepClimbing
opened
1 year ago
0
Connected component analysis
#210
davidborland
opened
1 year ago
0
Get all assignments in statistics
#209
davidborland
closed
1 year ago
0
Snap Z in 3D view to same orientation as 2D view
#208
JustKeepClimbing
closed
1 year ago
1
QC for addressing false negatives (i.e., ground truth nuclei with no automated pre-segmentations)
#207
JustKeepClimbing
opened
1 year ago
0
removed extra annotation_assigned_to history metadata to be consisten…
#206
hyi
closed
1 year ago
0
Handle missing region in getRegionInfo
#205
davidborland
closed
1 year ago
0
Add request_new parameter when requesting new refine assignment
#204
davidborland
closed
1 year ago
0
added request_new parameter in assignment endpoint
#203
hyi
closed
1 year ago
0
Load assignment on load instead of mount for faster initial loading
#202
davidborland
closed
1 year ago
0
Feature/get assignments performance
#201
davidborland
closed
1 year ago
0
Feature/get assignments performance
#200
davidborland
closed
1 year ago
0
Bugfix/handle reject action and add status to assignment endpoint response
#199
hyi
closed
1 year ago
0
Fix compiler error
#198
davidborland
closed
1 year ago
0
Render slice view after changing contour visibility
#197
davidborland
closed
1 year ago
0
Bugfix/region highlight bugs
#196
davidborland
closed
1 year ago
0
Remove default keypress from interactor styles
#195
davidborland
closed
1 year ago
0
Feature/visibility control
#194
davidborland
closed
1 year ago
0
Fix out of bounds issue in getImageLabel
#193
davidborland
closed
2 years ago
0
Feature/link widgets
#192
davidborland
closed
2 years ago
0
Feature/3d highlighting
#191
davidborland
closed
2 years ago
0
Feature/code clean up
#190
davidborland
closed
2 years ago
0
Feature/load on demand
#189
hyi
closed
2 years ago
1
Updating progress dashboard
#188
JustKeepClimbing
opened
2 years ago
8
Feature/3d editing
#187
davidborland
closed
2 years ago
0
fixed create region server bug
#186
hyi
closed
2 years ago
0
Feature/autosave integration
#185
davidborland
closed
2 years ago
0
174 auto save and merge when claiming and removing
#184
hyi
closed
2 years ago
0
Feature/adjust assignment selection
#183
davidborland
closed
2 years ago
0
Exploring to automatically unassign any assignment/reviews for a user when the user is removed from the system
#182
hyi
closed
1 year ago
2
Save before claiming/removing
#181
davidborland
closed
2 years ago
0
Move updated user annotation assignment mask to the general open for review queue
#180
hyi
closed
1 year ago
5
Fix multiple key press problem in review mode
#179
davidborland
closed
2 years ago
0
Claim after add region fails
#178
davidborland
closed
2 years ago
2
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