wdls
directory. Pipelines/wdls used in this repository for data processing can be imported into a relevant environment like Terra (https://firecloud.terra.bio/#).code
directory
Virus genomes and annotation have been deposited on Zenondo DOI: https://zenodo.org/record/6579480#.Yo3xHZNBweY
If you find any of the supporting code or information useful, please remember to cite the following articles:
And S. Nayfach et al. for relevant code for organising viruses into vOTUs and genus-level groups.