search

Rdatatable / data.table

R's data.table package extends data.frame:
http://r-datatable.com
Mozilla Public License 2.0
3.56k stars 974 forks source link

[feature request]truncate long strings when pretty printing a data.table preview #1316

Closed jan-glx closed 9 years ago

jan-glx commented 9 years ago

I love how data.table by default only prints the first and last 5 rows of a long table. However I often encounter data with columns with very long strings, which destroys the whole effect.

best- Jan

E.g. imagine this one with additional line breaks from the rstudio console:

> dt
                    #ID(s) interactor A              ID(s) interactor B
     1:                uniprotkb:P49418                uniprotkb:O43426
     2:                uniprotkb:P49418              intact:EBI-7121639
     3:                uniprotkb:P49418              intact:EBI-7121654
     4:                uniprotkb:P49418              intact:EBI-7121715
     5:              intact:EBI-7121765                uniprotkb:P49418
    ---                                                                
531942:                uniprotkb:P40089             intact:EBI-10825217
531943:                uniprotkb:P40089             intact:EBI-10824938
531944:                uniprotkb:P46098                uniprotkb:P46098
531945:                uniprotkb:O95264                uniprotkb:P46098
531946: uniprotkb:P12390-PRO_0000000381 uniprotkb:Q05941-PRO_0000000369
                                                                                                                                             Alt. ID(s) interactor A
     1: intact:EBI-7121510|intact:MINT-109264|uniprotkb:Q8N4G0|uniprotkb:Q75MJ8|uniprotkb:A4D1X8|uniprotkb:O43538|uniprotkb:A4D1X9|uniprotkb:Q75MM3|uniprotkb:Q75MK5
     2: intact:EBI-7121510|intact:MINT-109264|uniprotkb:Q8N4G0|uniprotkb:Q75MJ8|uniprotkb:A4D1X8|uniprotkb:O43538|uniprotkb:A4D1X9|uniprotkb:Q75MM3|uniprotkb:Q75MK5
     3: intact:EBI-7121510|intact:MINT-109264|uniprotkb:Q8N4G0|uniprotkb:Q75MJ8|uniprotkb:A4D1X8|uniprotkb:O43538|uniprotkb:A4D1X9|uniprotkb:Q75MM3|uniprotkb:Q75MK5
     4: intact:EBI-7121510|intact:MINT-109264|uniprotkb:Q8N4G0|uniprotkb:Q75MJ8|uniprotkb:A4D1X8|uniprotkb:O43538|uniprotkb:A4D1X9|uniprotkb:Q75MM3|uniprotkb:Q75MK5
     5:                                                                                                                                          intact:MINT-8094691
    ---                                                                                                                                                             
531942:                                                                                                                            intact:EBI-10236|uniprotkb:D3DM53
531943:                                                                                                                            intact:EBI-10236|uniprotkb:D3DM53
531944:                                     intact:EBI-9008743|uniprotkb:G5E986|uniprotkb:B4DSY6|uniprotkb:Q9BSZ9|uniprotkb:Q99918|uniprotkb:Q7KZM7|uniprotkb:O60854
531945:                                                                                                         intact:EBI-9008726|uniprotkb:Q0VJC3|uniprotkb:B0YJ23
531946:                                                                                                                                          intact:EBI-10916775
                                                                                                                                             Alt. ID(s) interactor B
     1:                                                                                        intact:EBI-2821539|uniprotkb:Q4KMR1|uniprotkb:O94984|uniprotkb:O43425
     2:                                                                                                                                          intact:MINT-8094608
     3:                                                                                                                                          intact:MINT-8094645
     4:                                                                                                                                          intact:MINT-8094663
     5: intact:EBI-7121510|intact:MINT-109264|uniprotkb:Q8N4G0|uniprotkb:Q75MJ8|uniprotkb:A4D1X8|uniprotkb:O43538|uniprotkb:A4D1X9|uniprotkb:Q75MM3|uniprotkb:Q75MK5
    ---                                                                                                                                                             
531942:                                                                                                                              rnacentral:URS00006D8611_559292
531943:                                                                                                                              rnacentral:URS000070B478_559292
531944:                                     intact:EBI-9008743|uniprotkb:G5E986|uniprotkb:B4DSY6|uniprotkb:Q9BSZ9|uniprotkb:Q99918|uniprotkb:Q7KZM7|uniprotkb:O60854
531945:                                     intact:EBI-9008743|uniprotkb:G5E986|uniprotkb:B4DSY6|uniprotkb:Q9BSZ9|uniprotkb:Q99918|uniprotkb:Q7KZM7|uniprotkb:O60854
531946:                                                                                                                                          intact:EBI-11166365
                                                                                                                                                                                                                                                                                                                               Alias(es) interactor A
     1:                                                                                                                                                                                                                       psi-mi:amph_human(display_long)|uniprotkb:AMPH(gene name)|psi-mi:AMPH(display_short)|uniprotkb:AMPH1(gene name synonym)
     2:                                                                                                                                                                                                                       psi-mi:amph_human(display_long)|uniprotkb:AMPH(gene name)|psi-mi:AMPH(display_short)|uniprotkb:AMPH1(gene name synonym)
     3:                                                                                                                                                                                                                       psi-mi:amph_human(display_long)|uniprotkb:AMPH(gene name)|psi-mi:AMPH(display_short)|uniprotkb:AMPH1(gene name synonym)
     4:                                                                                                                                                                                                                       psi-mi:amph_human(display_long)|uniprotkb:AMPH(gene name)|psi-mi:AMPH(display_short)|uniprotkb:AMPH1(gene name synonym)
     5:                                                                                                                                                                                                                                                                              psi-mi:xrprrghal(display_short)|psi-mi:EBI-7121765(display_long)
    ---                                                                                                                                                                                                                                                                                                                                              
531942:                                                                                                                                                                                                                            psi-mi:lsm5_yeast(display_long)|uniprotkb:LSM5(gene name)|psi-mi:LSM5(display_short)|uniprotkb:YER146W(locus name)
531943:                                                                                                                                                                                                                            psi-mi:lsm5_yeast(display_long)|uniprotkb:LSM5(gene name)|psi-mi:LSM5(display_short)|uniprotkb:YER146W(locus name)
531944: psi-mi:5ht3a_human(display_long)|uniprotkb:HTR3A(gene name)|psi-mi:HTR3A(display_short)|uniprotkb:5-hydroxytryptamine receptor 3(gene name synonym)|uniprotkb:5HT3R(gene name synonym)|uniprotkb:HTR3(gene name synonym)|uniprotkb:Serotonin receptor 3A(gene name synonym)|uniprotkb:Serotonin-gated ion channel receptor(gene name synonym)
531945:                                                                                                                                                                                                    psi-mi:5ht3b_human(display_long)|uniprotkb:HTR3B(gene name)|psi-mi:HTR3B(display_short)|uniprotkb:Serotonin receptor 3B(gene name synonym)
531946:                                                                                                                         psi-mi:p12390-pro_0000000381(display_long)|uniprotkb:Chrnb2(gene name)|psi-mi:Chrnb2(display_short)|uniprotkb:Acrb2(gene name synonym)|uniprotkb:Neuronal acetylcholine receptor non-alpha-1 chain(gene name synonym)
                                                                                                                                                                                                                                                                                                                               Alias(es) interactor B
     1:                                                                                                                              psi-mi:synj1_human(display_long)|uniprotkb:SYNJ1(gene name)|psi-mi:SYNJ1(display_short)|uniprotkb:KIAA0910(gene name synonym)|uniprotkb:Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1(gene name synonym)
     2:                                                                                                                                                                                                                                                                              psi-mi:vrparrvlw(display_short)|psi-mi:EBI-7121639(display_long)
     3:                                                                                                                                                                                                                                                                              psi-mi:hrpvrraap(display_short)|psi-mi:EBI-7121654(display_long)
     4:                                                                                                                                                                                                                                                                              psi-mi:vrptraada(display_short)|psi-mi:EBI-7121715(display_long)
     5:                                                                                                                                                                                                                       psi-mi:amph_human(display_long)|uniprotkb:AMPH(gene name)|psi-mi:AMPH(display_short)|uniprotkb:AMPH1(gene name synonym)
    ---                                                                                                                                                                                                                                                                                                                                              
531942:                                                                                                                                                                                                                                                                           psi-mi:snru4 yeast(display_short)|psi-mi:EBI-10825217(display_long)
531943:                                                                                                                                                                                                                                                                           psi-mi:snru6 yeast(display_short)|psi-mi:EBI-10824938(display_long)
531944: psi-mi:5ht3a_human(display_long)|uniprotkb:HTR3A(gene name)|psi-mi:HTR3A(display_short)|uniprotkb:5-hydroxytryptamine receptor 3(gene name synonym)|uniprotkb:5HT3R(gene name synonym)|uniprotkb:HTR3(gene name synonym)|uniprotkb:Serotonin receptor 3A(gene name synonym)|uniprotkb:Serotonin-gated ion channel receptor(gene name synonym)
531945: psi-mi:5ht3a_human(display_long)|uniprotkb:HTR3A(gene name)|psi-mi:HTR3A(display_short)|uniprotkb:5-hydroxytryptamine receptor 3(gene name synonym)|uniprotkb:5HT3R(gene name synonym)|uniprotkb:HTR3(gene name synonym)|uniprotkb:Serotonin receptor 3A(gene name synonym)|uniprotkb:Serotonin-gated ion channel receptor(gene name synonym)
531946:                                                                                                                                                                                                        psi-mi:q05941-pro_0000000369(display_long)|uniprotkb:Chrna7(gene name)|psi-mi:Chrna7(display_short)|uniprotkb:Acra7(gene name synonym)
                          Interaction detection method(s) Publication 1st author(s)         Publication Identifier(s)
     1:                   psi-mi:"MI:0084"(phage display)      Cestra et al. (1999) pubmed:10542231|mint:MINT-5211933
     2:                   psi-mi:"MI:0084"(phage display)      Cestra et al. (1999) pubmed:10542231|mint:MINT-5211933
     3:                   psi-mi:"MI:0084"(phage display)      Cestra et al. (1999) pubmed:10542231|mint:MINT-5211933
     4:                   psi-mi:"MI:0084"(phage display)      Cestra et al. (1999) pubmed:10542231|mint:MINT-5211933
     5:                   psi-mi:"MI:0084"(phage display)      Cestra et al. (1999) pubmed:10542231|mint:MINT-5211933
    ---                                                                                                              
531942:                 psi-mi:"MI:0027"(cosedimentation)   Fernandez et al. (2004)                   pubmed:15075370
531943:                 psi-mi:"MI:0027"(cosedimentation)   Fernandez et al. (2004)                   pubmed:15075370
531944:         psi-mi:"MI:0872"(atomic force microscopy)     Barrera et al. (2005)     imex:IM-24465|pubmed:16116092
531945:         psi-mi:"MI:0872"(atomic force microscopy)     Barrera et al. (2005)     imex:IM-24465|pubmed:16116092
531946: psi-mi:"MI:0006"(anti bait coimmunoprecipitation)         Liu et al. (2009)     imex:IM-24475|pubmed:19176801
                                                                               Taxid interactor A
     1:                                                taxid:9606(human)|taxid:9606(Homo sapiens)
     2:                                                taxid:9606(human)|taxid:9606(Homo sapiens)
     3:                                                taxid:9606(human)|taxid:9606(Homo sapiens)
     4:                                                taxid:9606(human)|taxid:9606(Homo sapiens)
     5:          taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)")
    ---                                                                                          
531942: taxid:559292(yeast)|taxid:559292("Saccharomyces cerevisiae (strain ATCC 204508 / S288c)")
531943: taxid:559292(yeast)|taxid:559292("Saccharomyces cerevisiae (strain ATCC 204508 / S288c)")
531944:                                                taxid:9606(human)|taxid:9606(Homo sapiens)
531945:                                                taxid:9606(human)|taxid:9606(Homo sapiens)
531946:                                   taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)")
                                                                               Taxid interactor B
     1:                                                taxid:9606(human)|taxid:9606(Homo sapiens)
     2:          taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)")
     3:          taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)")
     4:          taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)")
     5:                                                taxid:9606(human)|taxid:9606(Homo sapiens)
    ---                                                                                          
531942: taxid:559292(yeast)|taxid:559292("Saccharomyces cerevisiae (strain ATCC 204508 / S288c)")
531943: taxid:559292(yeast)|taxid:559292("Saccharomyces cerevisiae (strain ATCC 204508 / S288c)")
531944:                                                taxid:9606(human)|taxid:9606(Homo sapiens)
531945:                                                taxid:9606(human)|taxid:9606(Homo sapiens)
531946:                                   taxid:10116(rat)|taxid:10116("Rattus norvegicus (Rat)")
                           Interaction type(s)       Source database(s)            Interaction identifier(s)
     1:   psi-mi:"MI:0407"(direct interaction)   psi-mi:"MI:0471"(MINT)   intact:EBI-7121552|mint:MINT-16056
     2:   psi-mi:"MI:0407"(direct interaction)   psi-mi:"MI:0471"(MINT) intact:EBI-7121634|mint:MINT-8094596
     3:   psi-mi:"MI:0407"(direct interaction)   psi-mi:"MI:0471"(MINT) intact:EBI-7121659|mint:MINT-8094627
     4:   psi-mi:"MI:0407"(direct interaction)   psi-mi:"MI:0471"(MINT) intact:EBI-7121710|mint:MINT-8094651
     5:   psi-mi:"MI:0407"(direct interaction)   psi-mi:"MI:0471"(MINT) intact:EBI-7121760|mint:MINT-8094677
    ---                                                                                                     
531942:       psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct)                  intact:EBI-10959038
531943:       psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct)                  intact:EBI-10959038
531944:   psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct)  intact:EBI-11163778|imex:IM-24465-1
531945:   psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct)  intact:EBI-11163796|imex:IM-24465-2
531946: psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct)  intact:EBI-11166371|imex:IM-24475-1
        Confidence value(s)               Expansion method(s)    Biological role(s) interactor A
     1: intact-miscore:0.56                                 - psi-mi:"MI:0499"(unspecified role)
     2: intact-miscore:0.44                                 - psi-mi:"MI:0499"(unspecified role)
     3: intact-miscore:0.44                                 - psi-mi:"MI:0499"(unspecified role)
     4: intact-miscore:0.44                                 - psi-mi:"MI:0499"(unspecified role)
     5: intact-miscore:0.44                                 - psi-mi:"MI:0499"(unspecified role)
    ---                                                                                         
531942: intact-miscore:0.46 psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role)
531943: intact-miscore:0.53 psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role)
531944: intact-miscore:0.36                                 - psi-mi:"MI:0499"(unspecified role)
531945: intact-miscore:0.36                                 - psi-mi:"MI:0499"(unspecified role)
531946: intact-miscore:0.40                                 - psi-mi:"MI:0499"(unspecified role)
           Biological role(s) interactor B   Experimental role(s) interactor A   Experimental role(s) interactor B
     1: psi-mi:"MI:0499"(unspecified role)              psi-mi:"MI:0498"(prey)              psi-mi:"MI:0496"(bait)
     2: psi-mi:"MI:0499"(unspecified role)              psi-mi:"MI:0498"(prey)              psi-mi:"MI:0496"(bait)
     3: psi-mi:"MI:0499"(unspecified role)              psi-mi:"MI:0498"(prey)              psi-mi:"MI:0496"(bait)
     4: psi-mi:"MI:0499"(unspecified role)              psi-mi:"MI:0498"(prey)              psi-mi:"MI:0496"(bait)
     5: psi-mi:"MI:0499"(unspecified role)              psi-mi:"MI:0496"(bait)              psi-mi:"MI:0498"(prey)
    ---                                                                                                           
531942: psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component)
531943: psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component)
531944: psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component)
531945: psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component)
531946: psi-mi:"MI:0499"(unspecified role)              psi-mi:"MI:0498"(prey)              psi-mi:"MI:0496"(bait)
             Type(s) interactor A               Type(s) interactor B
     1: psi-mi:"MI:0326"(protein)          psi-mi:"MI:0326"(protein)
     2: psi-mi:"MI:0326"(protein)          psi-mi:"MI:0327"(peptide)
     3: psi-mi:"MI:0326"(protein)          psi-mi:"MI:0327"(peptide)
     4: psi-mi:"MI:0326"(protein)          psi-mi:"MI:0327"(peptide)
     5: psi-mi:"MI:0327"(peptide)          psi-mi:"MI:0326"(protein)
    ---                                                             
531942: psi-mi:"MI:0326"(protein) psi-mi:"MI:0320"(ribonucleic acid)
531943: psi-mi:"MI:0326"(protein) psi-mi:"MI:0320"(ribonucleic acid)
531944: psi-mi:"MI:0326"(protein)          psi-mi:"MI:0326"(protein)
531945: psi-mi:"MI:0326"(protein)          psi-mi:"MI:0326"(protein)
531946: psi-mi:"MI:0326"(protein)          psi-mi:"MI:0326"(protein)
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   Xref(s) interactor A
     1:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              interpro:IPR027267|interpro:IPR004148(BAR)|interpro:IPR001452(Src homology-3)|interpro:IPR003017(Amphiphysin, isoform 1)|interpro:IPR003005(Amphiphysin)|rcsb pdb:1KY7|rcsb pdb:1UTC|rcsb pdb:3SOG|rcsb pdb:4ATM|go:"GO:0007612"(learning)|go:"GO:0030054"(cell junction)|go:"GO:0006897"(endocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0007268"(synaptic transmission)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0031256"(leading edge membrane)|go:"GO:0005543"(phospholipid binding)|go:"GO:0030672"(synaptic vesicle membrane)|ensembl:ENSP00000348602|ensembl:ENSP00000317441|ensembl:ENSG00000078053|ensembl:ENST00000356264|ensembl:ENST00000325590|refseq:NP_647477.1|refseq:NP_001626.1|mint:MINT-376294(identity)
     2:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             interpro:IPR027267|interpro:IPR004148(BAR)|interpro:IPR001452(Src homology-3)|interpro:IPR003017(Amphiphysin, isoform 1)|interpro:IPR003005(Amphiphysin)|rcsb pdb:1KY7|rcsb pdb:1UTC|rcsb pdb:3SOG|rcsb pdb:4ATM|go:"GO:0007612"(learning)|go:"GO:0030054"(cell junction)|go:"GO:0006897"(endocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0007268"(synaptic transmission)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0031256"(leading edge membrane)|go:"GO:0005543"(phospholipid binding)|go:"GO:0030672"(synaptic vesicle membrane)|ensembl:ENSP00000348602|ensembl:ENSP00000317441|ensembl:ENSG00000078053|ensembl:ENST00000356264|ensembl:ENST00000325590|refseq:NP_647477.1|refseq:NP_001626.1|mint:MINT-8094601(identity)
     3:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             interpro:IPR027267|interpro:IPR004148(BAR)|interpro:IPR001452(Src homology-3)|interpro:IPR003017(Amphiphysin, isoform 1)|interpro:IPR003005(Amphiphysin)|rcsb pdb:1KY7|rcsb pdb:1UTC|rcsb pdb:3SOG|rcsb pdb:4ATM|go:"GO:0007612"(learning)|go:"GO:0030054"(cell junction)|go:"GO:0006897"(endocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0007268"(synaptic transmission)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0031256"(leading edge membrane)|go:"GO:0005543"(phospholipid binding)|go:"GO:0030672"(synaptic vesicle membrane)|ensembl:ENSP00000348602|ensembl:ENSP00000317441|ensembl:ENSG00000078053|ensembl:ENST00000356264|ensembl:ENST00000325590|refseq:NP_647477.1|refseq:NP_001626.1|mint:MINT-8094629(identity)
     4:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             interpro:IPR027267|interpro:IPR004148(BAR)|interpro:IPR001452(Src homology-3)|interpro:IPR003017(Amphiphysin, isoform 1)|interpro:IPR003005(Amphiphysin)|rcsb pdb:1KY7|rcsb pdb:1UTC|rcsb pdb:3SOG|rcsb pdb:4ATM|go:"GO:0007612"(learning)|go:"GO:0030054"(cell junction)|go:"GO:0006897"(endocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0007268"(synaptic transmission)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0031256"(leading edge membrane)|go:"GO:0005543"(phospholipid binding)|go:"GO:0030672"(synaptic vesicle membrane)|ensembl:ENSP00000348602|ensembl:ENSP00000317441|ensembl:ENSG00000078053|ensembl:ENST00000356264|ensembl:ENST00000325590|refseq:NP_647477.1|refseq:NP_001626.1|mint:MINT-8094653(identity)
     5:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     mint:MINT-8094693(identity)
    ---                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
531942:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           interpro:IPR006649(Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|rcsb pdb:4M7D|rcsb pdb:4M7A|rcsb pdb:4M78|rcsb pdb:4M77|rcsb pdb:4M75|rcsb pdb:4C92|rcsb pdb:4C8Q|sgd:S000000948|go:"GO:0008033"(tRNA processing)|go:"GO:0006364"(rRNA processing)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005688"(U6 snRNP)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0005732"(small nucleolar ribonucleoprotein complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|cygd:YER146w|refseq:NP_011073.1
531943:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           interpro:IPR006649(Like-Sm ribonucleoprotein, eukaryotic and archaea-type, core)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|rcsb pdb:4M7D|rcsb pdb:4M7A|rcsb pdb:4M78|rcsb pdb:4M77|rcsb pdb:4M75|rcsb pdb:4C92|rcsb pdb:4C8Q|sgd:S000000948|go:"GO:0008033"(tRNA processing)|go:"GO:0006364"(rRNA processing)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005688"(U6 snRNP)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0005732"(small nucleolar ribonucleoprotein complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|cygd:YER146w|refseq:NP_011073.1
531944: interpro:IPR027361|interpro:IPR018000|interpro:IPR008133(5-hydroxytryptamine 3 receptor, A subunit)|interpro:IPR008132(5-hydroxytryptamine 3 receptor)|interpro:IPR006202(Neurotransmitter-gated ion-channel ligand-binding)|interpro:IPR006201(Neurotransmitter-gated ion-channel)|interpro:IPR006029(Neurotransmitter-gated ion-channel transmembrane region)|go:"GO:0071363"(cellular response to growth factor stimulus)|go:"GO:0051378"(serotonin binding)|go:"GO:0045211"(postsynaptic membrane)|go:"GO:0043025"(neuronal cell body)|go:"GO:0042220"(response to cocaine)|go:"GO:0030424"(axon)|go:"GO:0030054"(cell junction)|go:"GO:0007586"(digestion)|go:"GO:0007268"(synaptic transmission)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0005737"(cytoplasm)|go:"GO:0005249"(voltage-gated potassium channel activity)|go:"GO:0005232"(serotonin-activated cation-selective channel activity)|go:"GO:0004993"(serotonin receptor activity)|go:"GO:0045471"(response to ethanol)|go:"GO:0055085"(transmembrane transport)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0007210"(serotonin receptor signaling pathway)|go:"GO:0006810"(transport)|go:"GO:0005886"(plasma membrane)|go:"GO:0004872"(receptor activity)|ensembl:ENST00000506841|ensembl:ENST00000504030|ensembl:ENST00000375498|ensembl:ENST00000355556|ensembl:ENST00000299961|ensembl:ENSP00000424776|ensembl:ENSP00000424189|ensembl:ENSP00000364648|ensembl:ENSP00000347754|ensembl:ENSP00000299961|ensembl:ENSG00000166736|refseq:NP_000860.2|refseq:NP_998786.2|refseq:NP_001155244.1|reactome:REACT_25387
531945:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               interpro:IPR027361|interpro:IPR008134(5-hydroxytryptamine 3 receptor, B subunit)|interpro:IPR008132(5-hydroxytryptamine 3 receptor)|interpro:IPR006202(Neurotransmitter-gated ion-channel ligand-binding)|interpro:IPR006201(Neurotransmitter-gated ion-channel)|interpro:IPR006029(Neurotransmitter-gated ion-channel transmembrane region)|go:"GO:0045211"(postsynaptic membrane)|go:"GO:0007268"(synaptic transmission)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0005232"(serotonin-activated cation-selective channel activity)|go:"GO:0004993"(serotonin receptor activity)|go:"GO:0009986"(cell surface)|go:"GO:0055085"(transmembrane transport)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0006810"(transport)|go:"GO:0005886"(plasma membrane)|go:"GO:0005216"(ion channel activity)|ensembl:ENST00000537778|ensembl:ENST00000260191|ensembl:ENSP00000443118|ensembl:ENSP00000260191|ensembl:ENSG00000149305|refseq:NP_006019.1|refseq:XP_011541365.1|reactome:REACT_25387
531946:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                intact:EBI-9008812(chain-parent)
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      Xref(s) interactor B
     1: interpro:IPR002013(Synaptojanin, N-terminal)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR000300(Inositol polyphosphate related phosphatase)|interpro:IPR005135(Endonuclease/exonuclease/phosphatase)|interpro:IPR015047(Region of unknown function DUF1866)|rcsb pdb:2VJ0|rcsb pdb:2DNR|rcsb pdb:1W80|go:"GO:1903390"(positive regulation of synaptic vesicle uncoating)|go:"GO:1901632"(regulation of synaptic vesicle membrane organization)|go:"GO:0044281"(small molecule metabolic process)|go:"GO:0006796"(phosphate-containing compound metabolic process)|go:"GO:0006644"(phospholipid metabolic process)|go:"GO:0046856"(phosphatidylinositol dephosphorylation)|go:"GO:0043647"(inositol phosphate metabolic process)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0005829"(cytosol)|go:"GO:0003723"(RNA binding)|go:"GO:0004439"(phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity)|go:"GO:0000166"(nucleotide binding)|go:"GO:0004445"(inositol-polyphosphate 5-phosphatase activity)|go:"GO:0048489"(synaptic vesicle transport)|go:"GO:0046855"(inositol phosphate dephosphorylation)|go:"GO:0046488"(phosphatidylinositol metabolic process)|go:"GO:0034595"(phosphatidylinositol phosphate 5-phosphatase activity)|go:"GO:0030117"(membrane coat)|go:"GO:0016191"(synaptic vesicle uncoating)|go:"GO:0016082"(synaptic vesicle priming)|go:"GO:0006836"(neurotransmitter transport)|go:"GO:0048488"(synaptic vesicle endocytosis)|ensembl:ENSP00000349903|ensembl:ENSG00000159082|ensembl:ENST00000357345|refseq:NP_982271.2|refseq:NP_003886.3|refseq:NP_001153778.1|refseq:NP_001153774.1|reactome:REACT_150352|reactome:REACT_150312|reactome:REACT_121025|mint:MINT-376287(identity)
     2:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        mint:MINT-8094610(identity)
     3:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        mint:MINT-8094647(identity)
     4:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        mint:MINT-8094665(identity)
     5:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                interpro:IPR027267|interpro:IPR004148(BAR)|interpro:IPR001452(Src homology-3)|interpro:IPR003017(Amphiphysin, isoform 1)|interpro:IPR003005(Amphiphysin)|rcsb pdb:1KY7|rcsb pdb:1UTC|rcsb pdb:3SOG|rcsb pdb:4ATM|go:"GO:0007612"(learning)|go:"GO:0030054"(cell junction)|go:"GO:0006897"(endocytosis)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0007268"(synaptic transmission)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0048488"(synaptic vesicle endocytosis)|go:"GO:0031256"(leading edge membrane)|go:"GO:0005543"(phospholipid binding)|go:"GO:0030672"(synaptic vesicle membrane)|ensembl:ENSP00000348602|ensembl:ENSP00000317441|ensembl:ENSG00000078053|ensembl:ENST00000356264|ensembl:ENST00000325590|refseq:NP_647477.1|refseq:NP_001626.1|mint:MINT-8094679(identity)
    ---                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
531942:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  -
531943:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  -
531944:                                                                                                                                                                                                    interpro:IPR027361|interpro:IPR018000|interpro:IPR008133(5-hydroxytryptamine 3 receptor, A subunit)|interpro:IPR008132(5-hydroxytryptamine 3 receptor)|interpro:IPR006202(Neurotransmitter-gated ion-channel ligand-binding)|interpro:IPR006201(Neurotransmitter-gated ion-channel)|interpro:IPR006029(Neurotransmitter-gated ion-channel transmembrane region)|go:"GO:0071363"(cellular response to growth factor stimulus)|go:"GO:0051378"(serotonin binding)|go:"GO:0045211"(postsynaptic membrane)|go:"GO:0043025"(neuronal cell body)|go:"GO:0042220"(response to cocaine)|go:"GO:0030424"(axon)|go:"GO:0030054"(cell junction)|go:"GO:0007586"(digestion)|go:"GO:0007268"(synaptic transmission)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0005737"(cytoplasm)|go:"GO:0005249"(voltage-gated potassium channel activity)|go:"GO:0005232"(serotonin-activated cation-selective channel activity)|go:"GO:0004993"(serotonin receptor activity)|go:"GO:0045471"(response to ethanol)|go:"GO:0055085"(transmembrane transport)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0007210"(serotonin receptor signaling pathway)|go:"GO:0006810"(transport)|go:"GO:0005886"(plasma membrane)|go:"GO:0004872"(receptor activity)|ensembl:ENST00000506841|ensembl:ENST00000504030|ensembl:ENST00000375498|ensembl:ENST00000355556|ensembl:ENST00000299961|ensembl:ENSP00000424776|ensembl:ENSP00000424189|ensembl:ENSP00000364648|ensembl:ENSP00000347754|ensembl:ENSP00000299961|ensembl:ENSG00000166736|refseq:NP_000860.2|refseq:NP_998786.2|refseq:NP_001155244.1|reactome:REACT_25387
531945:                                                                                                                                                                                                    interpro:IPR027361|interpro:IPR018000|interpro:IPR008133(5-hydroxytryptamine 3 receptor, A subunit)|interpro:IPR008132(5-hydroxytryptamine 3 receptor)|interpro:IPR006202(Neurotransmitter-gated ion-channel ligand-binding)|interpro:IPR006201(Neurotransmitter-gated ion-channel)|interpro:IPR006029(Neurotransmitter-gated ion-channel transmembrane region)|go:"GO:0071363"(cellular response to growth factor stimulus)|go:"GO:0051378"(serotonin binding)|go:"GO:0045211"(postsynaptic membrane)|go:"GO:0043025"(neuronal cell body)|go:"GO:0042220"(response to cocaine)|go:"GO:0030424"(axon)|go:"GO:0030054"(cell junction)|go:"GO:0007586"(digestion)|go:"GO:0007268"(synaptic transmission)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0005737"(cytoplasm)|go:"GO:0005249"(voltage-gated potassium channel activity)|go:"GO:0005232"(serotonin-activated cation-selective channel activity)|go:"GO:0004993"(serotonin receptor activity)|go:"GO:0045471"(response to ethanol)|go:"GO:0055085"(transmembrane transport)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0007210"(serotonin receptor signaling pathway)|go:"GO:0006810"(transport)|go:"GO:0005886"(plasma membrane)|go:"GO:0004872"(receptor activity)|ensembl:ENST00000506841|ensembl:ENST00000504030|ensembl:ENST00000375498|ensembl:ENST00000355556|ensembl:ENST00000299961|ensembl:ENSP00000424776|ensembl:ENSP00000424189|ensembl:ENSP00000364648|ensembl:ENSP00000347754|ensembl:ENSP00000299961|ensembl:ENSG00000166736|refseq:NP_000860.2|refseq:NP_998786.2|refseq:NP_001155244.1|reactome:REACT_25387
531946:                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     intact:EBI-79422(chain-parent)
        Interaction Xref(s)
     1:                   -
     2:                   -
     3:                   -
     4:                   -
     5:                   -
    ---                    
531942:                   -
531943:                   -
531944:                   -
531945:                   -
531946:                   -
                                                                                                                                                                                                                                                                                                                                                                                                                                                       Annotation(s) interactor A
     1: function:May participate in mechanisms of regulated exocytosis in synapses and certain endocrine cell types. May control the properties of the membrane associated cytoskeleton|comment:mint|comment:homomint|function:Antibodies against AMPH are detected in patients with stiff-man syndrome, a rare disease of the central nervous system characterized by progressive rigidity of the body musculature with superimposed painful spasms|comment:"Stoichiometry: 1.0"
     2:                              function:May participate in mechanisms of regulated exocytosis in synapses and certain endocrine cell types. May control the properties of the membrane associated cytoskeleton|comment:mint|comment:homomint|function:Antibodies against AMPH are detected in patients with stiff-man syndrome, a rare disease of the central nervous system characterized by progressive rigidity of the body musculature with superimposed painful spasms
     3:                              function:May participate in mechanisms of regulated exocytosis in synapses and certain endocrine cell types. May control the properties of the membrane associated cytoskeleton|comment:mint|comment:homomint|function:Antibodies against AMPH are detected in patients with stiff-man syndrome, a rare disease of the central nervous system characterized by progressive rigidity of the body musculature with superimposed painful spasms
     4:                              function:May participate in mechanisms of regulated exocytosis in synapses and certain endocrine cell types. May control the properties of the membrane associated cytoskeleton|comment:mint|comment:homomint|function:Antibodies against AMPH are detected in patients with stiff-man syndrome, a rare disease of the central nervous system characterized by progressive rigidity of the body musculature with superimposed painful spasms
     5:                                                                                                                                                                                                                                                                                                                                                                                                                                           comment:mint|no-uniprot-update:
    ---                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
531942:                                                                                                                                                                                                                                                                                                                                                                                                                                                                         -
531943:                                                                                                                                                                                                                                                                                                                                                                                                                                                                         -
531944:                                                                                                                                                                                                                                                                                                                                                                                                                                                                         -
531945:                                                                                                                                                                                                                                                                                                                                                                                                                                                                         -
531946:                                                                                                                                                                                                                                                                                                                                                                                                                                                                         -
                                                                                                                                                                                                                                                                                                                                                                                                                          Annotation(s) interactor B
     1:                                                                                                                                                                                                                                                                                                                                                                                                                 comment:"Stoichiometry: 1.0"
     2:                                                                                                                                                                                                                                                                                                                                                                                                              comment:mint|no-uniprot-update:
     3:                                                                                                                                                                                                                                                                                                                                                                                                              comment:mint|no-uniprot-update:
     4:                                                                                                                                                                                                                                                                                                                                                                                                              comment:mint|no-uniprot-update:
     5: function:May participate in mechanisms of regulated exocytosis in synapses and certain endocrine cell types. May control the properties of the membrane associated cytoskeleton|comment:mint|comment:homomint|function:Antibodies against AMPH are detected in patients with stiff-man syndrome, a rare disease of the central nervous system characterized by progressive rigidity of the body musculature with superimposed painful spasms
    ---                                                                                                                                                                                                                                                                                                                                                                                                                                             
531942:                                                                                                                                                                                                                                                                                                                                                                                                                                            -
531943:                                                                                                                                                                                                                                                                                                                                                                                                                                            -
531944:                                                                                                                                                                                                                                                                                                                                                                                                                                            -
531945:                                                                                                                                                                                                                                                                                                                                                                                                                                            -
531946:                                                                                                                                                                                                                                                                                                                                                                                                                                            -
                                                                                Interaction annotation(s)
     1:                                                      comment:homomint|comment:domino|comment:mint
     2:                                                   figure legend:F1 F2|comment:domino|comment:mint
     3:                                                   figure legend:F1 F2|comment:domino|comment:mint
     4:                                                   figure legend:F1 F2|comment:domino|comment:mint
     5:                                                   figure legend:F1 F2|comment:domino|comment:mint
    ---                                                                                                  
531942:                                                  figure legend:Fig5B|curation depth:imex curation
531943:                                                  figure legend:Fig5B|curation depth:imex curation
531944: figure legend:Fig. 3|full coverage:Only protein-protein interactions|curation depth:imex curation
531945: figure legend:Fig. 4|full coverage:Only protein-protein interactions|curation depth:imex curation
531946:     figure legend:3E|full coverage:Only protein-protein interactions|curation depth:imex curation
                                                                                 Host organism(s) Interaction parameter(s)
     1:                                                     taxid:-1(in vitro)|taxid:-1(In vitro)                        -
     2:                                                     taxid:-1(in vitro)|taxid:-1(In vitro)                        -
     3:                                                     taxid:-1(in vitro)|taxid:-1(In vitro)                        -
     4:                                                     taxid:-1(in vitro)|taxid:-1(In vitro)                        -
     5:                                                     taxid:-1(in vitro)|taxid:-1(In vitro)                        -
    ---                                                                                                                   
531942: taxid:559292(yeast)|taxid:559292("Saccharomyces cerevisiae (strain ATCC 204508 / S288c)")                        -
531943: taxid:559292(yeast)|taxid:559292("Saccharomyces cerevisiae (strain ATCC 204508 / S288c)")                        -
531944:                                                     taxid:-1(in vitro)|taxid:-1(In vitro)                        -
531945:                                                     taxid:-1(in vitro)|taxid:-1(In vitro)                        -
531946:                                 taxid:10116(rat-forebrain)|taxid:10116(Rattus norvegicus)                        -
        Creation date Update date                Checksum(s) interactor A               Checksum(s) interactor B
     1:    2001/01/10  2014/10/16   rogid:vrgVrVoYr45cUe4X6L/zBAE1RtU9606  rogid:RA73eMbCn6F7MD0ItxF/V7QbjqM9606
     2:    2001/01/10  2014/10/16   rogid:vrgVrVoYr45cUe4X6L/zBAE1RtU9606    rogid:lPy6gBhpgvyGSYgOqeHbjcqBtMQ-2
     3:    2001/01/10  2014/10/16   rogid:vrgVrVoYr45cUe4X6L/zBAE1RtU9606    rogid:GsDnsVmAo8ZZoKTZ4/uDb2x+h3c-2
     4:    2001/01/10  2014/10/16   rogid:vrgVrVoYr45cUe4X6L/zBAE1RtU9606    rogid:M+f6GE3SQXrMBiIVttW1MKhz3M0-2
     5:    2001/01/10  2014/10/16     rogid:cilZXZ3YLDI1s7n8WNRyUE6EnJQ-2  rogid:vrgVrVoYr45cUe4X6L/zBAE1RtU9606
    ---                                                                                                         
531942:    2015/08/10  2015/08/11 rogid:+Q2uxsm6FVpx5lehw62szhlGh8U559292                                      -
531943:    2015/08/10  2015/08/11 rogid:+Q2uxsm6FVpx5lehw62szhlGh8U559292                                      -
531944:    2015/08/13  2015/08/14   rogid:SqoCjKrZZe5otDgS5KIY1QjUoF89606  rogid:SqoCjKrZZe5otDgS5KIY1QjUoF89606
531945:    2015/08/13  2015/08/14   rogid:jtLQsB+qo6/8wmr0udigU7iuIeM9606  rogid:SqoCjKrZZe5otDgS5KIY1QjUoF89606
531946:    2015/08/18  2015/08/18  rogid:5AjLDg6yR5lGpaNBrMdBrjVPpmU10116 rogid:bmUzLZmifRl2LanGtqtbyvcdE2Y10116
                                              Interaction Checksum(s) Negative
     1: intact-crc:F4234557A3B54840|rigid:n+UcEH4PPLkFnIyvBiXrLefK/xU    false
     2: intact-crc:880913D9000BF26E|rigid:iRObbQsaUeX0PxuKeQwZ73s8iKU    false
     3: intact-crc:B68245E1F0508124|rigid:SlinPP5vIczFOGZjelrO+IXJq1s    false
     4: intact-crc:8F7F46DF027DF34E|rigid:uiWbDe6gaj1XcnJXNxuLLq2l/m4    false
     5: intact-crc:2EF43A66D9B2D428|rigid:/ki1zA46M4Q+rHcjCcxNhhk+5Xw    false
    ---                                                                       
531942:                                                             -    false
531943:                                                             -    false
531944:                             rigid:dJ7ffU2j9sKgRx97T5djWWIdXqo    false
531945:                             rigid:7XqKcjoS4Xuwf/OrUeVR6xY/Yo0    false
531946:                             rigid:3MLbcpTO3s1cW5QptQDCp/k4PMM    false
                                Feature(s) interactor A                          Feature(s) interactor B
     1:  binding-associated region:626-695(MINT-376295) binding-associated region:1063-1070(MINT-376288)
     2: binding-associated region:626-695(MINT-8094602)                                                -
     3: binding-associated region:626-695(MINT-8094630)                                                -
     4: binding-associated region:626-695(MINT-8094654)                                                -
     5:                                               -  binding-associated region:626-695(MINT-8094680)
    ---                                                                                                 
531942:                                     myc tag:c-c                                                -
531943:                                     myc tag:c-c                                                -
531944:                         myc tag:c-c|his tag:c-c                          myc tag:c-c|his tag:c-c
531945:                          his tag:c-c|v5 tag:c-c                          myc tag:c-c|his tag:c-c
531946:                                               -                                                -
        Stoichiometry(s) interactor A Stoichiometry(s) interactor B                  Identification method participant A
     1:                             -                             - psi-mi:"MI:0078"(nucleotide sequence identification)
     2:                             -                             - psi-mi:"MI:0078"(nucleotide sequence identification)
     3:                             -                             - psi-mi:"MI:0078"(nucleotide sequence identification)
     4:                             -                             - psi-mi:"MI:0078"(nucleotide sequence identification)
     5:                             -                             -                  psi-mi:"MI:0083"(peptide synthesis)
    ---                                                                                                                 
531942:                             -                             -              psi-mi:"MI:0705"(anti tag western blot)
531943:                             -                             -              psi-mi:"MI:0705"(anti tag western blot)
531944:                             5                             0          psi-mi:"MI:0396"(predetermined participant)
531945:                             3                             2          psi-mi:"MI:0396"(predetermined participant)
531946:                             -                             -                       psi-mi:"MI:0113"(western blot)
                         Identification method participant B
     1: psi-mi:"MI:0078"(nucleotide sequence identification)
     2:                  psi-mi:"MI:0083"(peptide synthesis)
     3:                  psi-mi:"MI:0083"(peptide synthesis)
     4:                  psi-mi:"MI:0083"(peptide synthesis)
     5: psi-mi:"MI:0078"(nucleotide sequence identification)
    ---                                                     
531942:                      psi-mi:"MI:0929"(northern blot)
531943:                      psi-mi:"MI:0929"(northern blot)
531944:          psi-mi:"MI:0396"(predetermined participant)
531945:          psi-mi:"MI:0396"(predetermined participant)
531946:                       psi-mi:"MI:0113"(western blot)
jangorecki commented 9 years ago

It was already PR by me to 1.9.5, search readme file for pretty :)

jan-glx commented 9 years ago

Awesome. Should become default.