ReproNim reproin issues

ReproNim / reproin

A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners

MIT License

47 stars 13 forks source link

issues

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Add a glossary

#70 asmacdo closed 1 month ago
3
Sample dataset fails

#69 neurolabusc closed 6 months ago
5
lists-update takes first session indicator among multiple?

#68 yarikoptic opened 7 months ago
0
reproin: study-convert option to consider accessions since the last converted date

#67 yarikoptic opened 9 months ago
0
New commands found to be forgotten to be finished

#66 yarikoptic closed 10 months ago
0
Bringing the data into reproin-compliant form

#65 Evgeniia-Gapontseva opened 11 months ago
10
Document/establish "ultimate" YODA setup

#64 yarikoptic opened 11 months ago
0
shub latest image is not so latest

#63 feilong closed 11 months ago
1
may be add cubids as part of reproin container

#62 yarikoptic opened 1 year ago
0
An initial brief description of setup at DBIC

#61 yarikoptic closed 1 year ago
0
support a flavor of _run+ (e.g. _run+?) to increment within unique sequence

#60 yarikoptic opened 1 year ago
0
eye tracking

#59 yarikoptic opened 1 year ago
0
Siemens XA30 Software Differences

#58 jmatthews-rotman opened 1 year ago
7
"Unassigned" output

#57 jmatthews-rotman opened 1 year ago
10
Additional check while going through accessions

#56 yarikoptic opened 1 year ago
0
Multiple Names/Words in Tree Setup

#55 jmatthews-rotman closed 1 year ago
1
Treat '_ses-X*' indicator as "I do not state any session"

#54 yarikoptic opened 2 years ago
0
support multiple sessions within accession

#53 yarikoptic opened 2 years ago
0
Subject ID Details in Walkthrough

#52 jmatthews-rotman closed 1 year ago
2
spacetop study -- got _scans.tsv into git instead of annex

#51 yarikoptic closed 3 years ago
1
heuristic option: unknown_sequences = (error|skip|as-is)

#50 yarikoptic opened 3 years ago
0
Protocol labelling for b0 & b1 maps

#49 dlevitas closed 3 years ago
1
heuristic_option: (run) index_format option to allow for non-0-padded run indexes

#48 dlevitas opened 3 years ago
6
ImportError: cannot import name 'TraitType'

#47 dlevitas closed 3 years ago
3
Handling re-run fmap acquisitions

#46 dlevitas closed 3 years ago
3
Naming convention for acquisition with decimal value

#45 dlevitas closed 3 years ago
2
WiP ENH: bin/reproin - script to assist using heudiconv etc in a prototypical setup

#44 yarikoptic closed 4 years ago
0
How to handle scanner derivatives?

#43 mirestrepo opened 4 years ago
8
Version ReproIn (heuristic) and use etelemetry

#42 yarikoptic opened 4 years ago
0
MRS: initial notes

#41 yarikoptic opened 4 years ago
0
Naming convention for "setter" scans for T1w/T2w

#40 tsalo opened 4 years ago
11
Handling of single-band reference volumes and functional phase data

#39 tsalo closed 4 years ago
3
Explicit "intendedfor" annotation

#38 yarikoptic opened 4 years ago
3
Correcting typo in link to Singularity directory

#37 justbennet closed 5 years ago
1
Clarification for protocol naming conventions

#36 dlevitas closed 3 years ago
11
Question Regarding Sequence Names

#35 dlevitas closed 5 years ago
7
git-annex issue

#34 dlevitas closed 5 years ago
2
create/populate sub-X/sub-X_sessions.tsv files

#33 yarikoptic opened 5 years ago
0
Vendor lock to Siemens

#32 cni-md closed 4 years ago
8
ASL not supported?

#31 dkp opened 5 years ago
8
Why anat-T1w but dwi_dir-AP?

#30 dkp closed 5 years ago
4
bids validator hates dir-AP, but happy with acq-AP

#29 dkp closed 5 years ago
3
run reproin with docker

#28 dkp closed 5 years ago
3
ENH: Docker-compose

#27 mgxd opened 5 years ago
8
validator for reproin

#26 satra opened 5 years ago
2
RF: install dcm2niix and heudiconv from neurodebian

#25 yarikoptic closed 5 years ago
1
create a docker-compose file

#24 satra opened 5 years ago
4
default annex backend is not MD5!?

#23 yarikoptic opened 5 years ago
0
--datalad interfers with datalad run

#22 yarikoptic opened 5 years ago
0
Passing args to singularity image doesn't work

#21 mvdoc closed 6 years ago
1