Version 2: simple_workflow - the retour

1: Query on csv:

• find controls with IQ measures
• keep if they come from sites with more than 10 subjects

Overview Document

A google doc vision outlineing the overall draft approach is provided here: https://docs.google.com/document/d/1Mp3a81yTaugRs7ekpUpX247tuTv8lclhEDaiCb5HksM/edit#

Update as of 6/1/19

• The container is at: https://hub.docker.com/r/mgxd/mindboggle/tags 1.4.0-aws (simple workflow was run inside this container. and mindboggle runs freesurfer and ants).
• The .ttl files are at: https://github.com/dbkeator/simple2_NIDM_examples
• Example queries:
• ILX decoder: https://github.com/dbkeator/simple2_NIDM_examples/blob/master/datasets.datalad.org/nidm.json
• Results of continer run at: https://sensein.github.io/open-data-processing/
• CSV version of Simple2 data: https://www.dropbox.com/s/8lqhbsh0f25zem1/simple2.csv?dl=0
• Sample statistics: https://github.com/satra/simple2-ohbm/blob/master/abide1-view.ipynb
  • also https://github.com/jbpoline/simple2_analysis
• Hypotheses: https://osf.io/yuv52