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RobokopU24
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ORION
Code that parses datasets from various sources and converts them to load graph databases.
MIT License
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adding option for specifying normalization_code_version in graph spec
#210
EvanDietzMorris
closed
7 months ago
0
Added aggregator_knowledge_sources for Automat-CAM-KP
#209
gaurav
closed
5 months ago
1
Update infores catalog link
#208
beasleyjonm
closed
7 months ago
0
Added parser for the KinAce database of kinase-substrate phosphorylat…
#205
beasleyjonm
closed
7 months ago
3
Treats refactor
#204
EvanDietzMorris
closed
7 months ago
0
updating variant normalization tests in accordance with changes in th…
#203
EvanDietzMorris
closed
7 months ago
0
Bump orjson from 3.8.10 to 3.9.15
#202
dependabot[bot]
closed
7 months ago
0
Logging cleanup
#201
EvanDietzMorris
closed
8 months ago
0
fixing publications issues
#200
EvanDietzMorris
closed
8 months ago
0
Data modeling fixes & normalization conflation
#199
EvanDietzMorris
closed
8 months ago
0
Yeast stuff
#198
EvanDietzMorris
closed
8 months ago
0
hmdb edges pointing the wrong direction
#196
cbizon
opened
9 months ago
4
Branding changes for the ORION name
#195
bpow
closed
8 months ago
1
Parser updates
#194
EvanDietzMorris
closed
10 months ago
0
Fixed a previous change that was causing publications to not be added…
#193
beasleyjonm
closed
10 months ago
1
Illegal characters in CURIES
#190
cbizon
opened
11 months ago
0
Reactome Ingest Issue
#189
beasleyjonm
opened
11 months ago
3
Parser and normalization updates
#188
EvanDietzMorris
closed
1 year ago
0
Ubergraph redundant
#187
beasleyjonm
opened
1 year ago
0
Ubergraph redundant
#186
beasleyjonm
closed
1 year ago
0
Drugmechdb
#185
beasleyjonm
closed
1 year ago
1
Drugmechdb
#184
beasleyjonm
closed
1 year ago
0
Update sri reference kg edges
#183
beasleyjonm
closed
1 year ago
1
Reactome complex handling
#182
beasleyjonm
closed
1 year ago
2
aligned bindingdb
#181
cbizon
closed
1 year ago
2
Drugmechdb
#180
beasleyjonm
closed
1 year ago
0
Update loadReactome.py
#179
beasleyjonm
closed
1 year ago
1
MCAT and USMLE question-answer datasets for benchmarking?
#178
karafecho
opened
1 year ago
0
Binding db updates
#176
beasleyjonm
closed
1 year ago
0
Adding 'MacromolecularComplex' category to Complex nodes, making a few other fixes.
#175
beasleyjonm
closed
1 year ago
0
fixing neo4j cli and adding option to specify node and edge filenames
#174
EvanDietzMorris
closed
1 year ago
0
Loading reactome
#173
beasleyjonm
closed
1 year ago
0
Loading reactome
#172
beasleyjonm
closed
1 year ago
0
fixing string db download url that changed
#171
EvanDietzMorris
closed
1 year ago
0
Get primary ks from hetionet
#168
cbizon
closed
11 months ago
0
Infores validation
#167
EvanDietzMorris
closed
1 year ago
0
Yeast
#166
EvanDietzMorris
closed
1 year ago
0
Add beginning of RDF file writer.
#165
balhoff
opened
1 year ago
1
HVPPI_parser
#164
mikeramon
closed
1 year ago
0
Hvppi parser
#163
mikeramon
closed
1 year ago
0
Binding db parser
#162
beasleyjonm
closed
1 year ago
1
Added parser to load the Binding-DB dataset.
#161
beasleyjonm
closed
1 year ago
0
We need to update Reactome to include some RNA(Sequence) Identifiers
#160
wumirose
opened
1 year ago
0
Karafecho patch 1
#159
karafecho
closed
1 year ago
1
Separated yeast parsers by data sources.
#158
beasleyjonm
closed
1 year ago
2
Alliance of Genome Resources versioning
#157
EvanDietzMorris
closed
11 months ago
0
Added new support for parsing BINDING-DB
#156
mikeramon
closed
1 year ago
0
Overhaul deployment
#155
cbizon
opened
1 year ago
2
Expose gene disease association scores
#154
beasleyjonm
closed
1 year ago
0
Minor edit, needed to remove quote marks.
#153
beasleyjonm
closed
1 year ago
0
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