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Roy-lab
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scMTNI
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In the fifth step of generating the prior network, how are the {sample}_allregulators.txt and ${sample}_allGenes.txt files obtained?
#19
xudongzhango
closed
2 weeks ago
4
The ’cluster.bam‘ file generated by the ’PrepareBamForLigerclusters.py‘ script does not contain any sequence information.
#18
xudongzhango
closed
2 weeks ago
6
Questions on batch correction with exp matrix (generation of .table file)
#17
mapo121
opened
1 month ago
1
rliger not converting list -> matrix
#16
mapo121
closed
1 month ago
3
Cannot link GSL correctly
#15
mapo121
closed
1 month ago
14
Calculating Branch-specific gain rate and Branch-specific loss rate
#14
mapo121
closed
1 month ago
2
Running scMTNI with subsampling
#13
PeterZZQ
closed
2 months ago
1
Some questions about the input data for scMTNI
#12
jingkun12137
closed
2 months ago
1
scMTNI output interpretation
#11
PrinceZarzees
closed
2 months ago
1
Issues with genPriorNetwork
#10
wuwei77lx
closed
2 months ago
1
celltype_tree_ancestor.txt
#9
mabaoweireadingene
closed
2 months ago
1
Running method with single cluster
#8
PeterZZQ
closed
2 months ago
4
prior network bed format
#7
shalberg
closed
11 months ago
1
Running scMTNI with prior matrix generated
#6
PeterZZQ
closed
1 year ago
7
Fix Scripts/Network_Analysis/genNetall_multi.R running forever
#5
sap01
opened
1 year ago
0
Issues Compiling Packages for scMTNI
#4
Anweshagorantla
closed
1 year ago
1
scATACseq_FBS.txt file missing
#3
pagarwal14
closed
1 year ago
1
make
#2
pagarwal14
closed
1 year ago
1
Master
#1
shiluzhang
closed
1 year ago
0