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SABS-R3-Epidemiology
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seirmo
This is a project to model the outbreak of an infectious disease with the SEIR model.
BSD 3-Clause "New" or "Revised" License
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fix tests
#114
rccreswell
closed
1 year ago
1
Fixed a few typos
#113
pitmonticone
opened
2 years ago
0
Add documentation to stochastic model
#112
KCGallagher
closed
2 years ago
1
Prevent runtime issues in plotting
#111
KCGallagher
closed
2 years ago
0
Turn example workflow scripts into ipynb files
#110
KCGallagher
closed
2 years ago
1
Error in image file in README
#109
patricia-lamy
closed
2 years ago
0
Correction to image file in README
#108
patricia-lamy
closed
2 years ago
1
Add plotters
#107
Elizabeth-Hayman
closed
2 years ago
3
Adapt stoch output collector for consistency
#106
KCGallagher
closed
2 years ago
0
Added test for stochastic output collector
#105
KCGallagher
closed
2 years ago
0
Add plotters
#104
KCGallagher
closed
2 years ago
0
Test branch
#103
KCGallagher
closed
2 years ago
1
Gillespie zeros
#102
KCGallagher
closed
2 years ago
1
Add readme
#101
patricia-lamy
closed
2 years ago
1
Dash apps need to be updated to use restructured models
#100
NicholasFan235
opened
2 years ago
0
The parameters rtol, atol, and method of solve_ivp should be settable by anyone using the DeterministicSEIRModel class.
#99
NicholasFan235
opened
2 years ago
0
Remove zero handling from solve_gillespie
#98
KCGallagher
closed
2 years ago
1
Add prospensity
#97
Elizabeth-Hayman
closed
2 years ago
8
Gillespie alg
#96
KCGallagher
closed
2 years ago
2
Write propensity function
#95
KCGallagher
closed
2 years ago
0
Implement Gillespie Algorithm
#94
KCGallagher
closed
2 years ago
0
Notes and Basic Structure
#93
NicholasFan235
closed
2 years ago
2
Write a new readme
#92
rccreswell
closed
2 years ago
1
Add runtime.txt
#91
I-Bouros
closed
2 years ago
1
Fix simulation app deployment
#90
rccreswell
closed
2 years ago
1
Fix deployed version of optimization app
#89
rccreswell
opened
2 years ago
0
Update dependencies
#88
I-Bouros
closed
2 years ago
1
fix simulation callback and loading
#87
rccreswell
closed
3 years ago
2
fix simulation
#86
rccreswell
closed
3 years ago
0
Re-instantiate figure to update figure on app deployment
#85
FarmHJ
opened
3 years ago
0
Issue 83 app improvement
#84
FarmHJ
closed
3 years ago
1
Improve optimisation app
#83
FarmHJ
closed
3 years ago
1
#82 Reset figure and run number
#82
siting-miao
closed
3 years ago
1
Reset optimisation app
#81
siting-miao
closed
3 years ago
1
Issue 74 optimisation app
#80
FarmHJ
closed
3 years ago
1
#78 Include ReducedModel in docs
#79
FarmHJ
closed
3 years ago
2
Missing class on Readthedocs
#78
FarmHJ
closed
3 years ago
1
Issue 58 infer parameter
#77
FarmHJ
closed
3 years ago
2
Debug Heroku app
#76
FarmHJ
closed
3 years ago
1
Heroku app crashed
#75
FarmHJ
closed
3 years ago
0
Optimisation app
#74
DavAug
closed
3 years ago
2
Issue 67 reduced model
#73
siting-miao
closed
3 years ago
1
#71 fix docs build
#72
DavAug
closed
3 years ago
1
Fix docs build
#71
DavAug
closed
3 years ago
1
Issue 20 jupyter notebook seir model
#70
FarmHJ
closed
3 years ago
1
Issue 64 model description
#69
FarmHJ
closed
3 years ago
1
Issue 66 extend seir model
#68
siting-miao
closed
3 years ago
1
Implement ReducedModel class
#67
DavAug
closed
3 years ago
2
Extend SEIRModel
#66
DavAug
closed
3 years ago
1
Create inference class
#65
FarmHJ
closed
3 years ago
1
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