BEATS_recon

TomoPy reconstruction scripts, notebooks and examples for the ID10-BEATS beamline of SESAME.
Datasets for running the tests can be found on the TomoBank

Examples:

Notebook	Description	Binder URL
BEATS_recon.ipynb	Standard reconstruction
BEATS_recon-phase.ipynb	Phase retrieval
convert360to180.ipynb	Extended field-of-view

Notes:

Activate TomoPy reconstruction environment

conda activate tomopy

Lanuch Jupyter Notebook or Jupyter Lab

jupyter notebook

jupyter lab

Add and activate a TomoPy kernel in Jupyter:

[!NOTE]
You probably don't need this.

1. Check and activate the environment where ipython is living

   conda env list
   source activate base

Install TomoPy kernel in it

python -m ipykernel install --user --name tomopy --display-name "conda (tomopy_source)"

Roadmap

Roadmap and list of tested features