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SGDDNB
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ShinyCell
Shiny Interactive Web Apps for Single-Cell Data
GNU General Public License v3.0
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Subscript out of bounds possibly seurat v5 compatibility
#89
rbutleriii
opened
2 weeks ago
1
Umaps on Normalized Data: Outlier expression of one gene
#88
ankushs0128
closed
1 month ago
0
support for webr/ shinylive?
#87
pratarora
opened
2 months ago
0
Create a Shiny package for handling spatial transcriptomics data
#86
howtofindme
opened
4 months ago
1
Use h5ad to create a shiny cell web
#85
Kur1sutaru
opened
4 months ago
0
"data" slot not found
#84
swarnalidasgupta
opened
5 months ago
4
Boxplot values in ShinyCell
#83
Dorithockman
opened
7 months ago
0
quotations instead of labels
#82
kenneditodd
opened
8 months ago
1
Unable to perform makeShinyApp in Seurat V5
#81
NSchippel
closed
8 months ago
3
Support Seurat v5 object
#80
zpohk
closed
8 months ago
0
Plugin feature
#79
davhum
closed
1 year ago
0
Add pathway analysis
#78
Kur1sutaru
closed
8 months ago
1
Add a home page to show the workflow and sample information
#77
Kur1sutaru
opened
1 year ago
0
added gene ranks, SCPlus additions, requested pages
#76
moore-drew
closed
1 year ago
0
add stacked plot in last module
#75
lishensuo
opened
1 year ago
0
Is it possible to incorporate seurat 5 object in the ShinyCell
#74
anksi
closed
1 year ago
5
Heatmap appears to mix up rank of cluster averages for a particular gene
#73
TeresaSteyn
opened
1 year ago
1
Add images and customize shinyapp
#72
ccomo0730
opened
1 year ago
0
Feature request: interactive plots
#71
vkartha
closed
1 year ago
1
Subsetting cells by multiple (different) annotation columns
#70
vkartha
closed
1 year ago
1
Forbidden character: |
#69
cyrilcros
closed
1 year ago
1
Error when using harmony integrated Seurat object
#68
jmzvillarreal
opened
1 year ago
0
Authentication
#67
my0916
closed
1 year ago
0
[Feature Request] Add transparency control option to "toggle graphics controls"
#66
CodyRamirez
opened
1 year ago
0
Added Single Gene analysis tab
#65
davhum
opened
1 year ago
0
Number of allowed categorical variable in the metadata column
#64
anksi
opened
1 year ago
1
Heatmap/bubbleplot gives unspecific error when subsetted for groups that have 0 expression for a gene
#63
NadineBestard
opened
1 year ago
1
heatmap request/suggestion
#62
davhum
opened
1 year ago
2
Split UMAP by condition
#61
dhivyaa-6
opened
1 year ago
4
visualize scATAC
#60
Parul-Kudtarkar
closed
1 year ago
2
Default genes in drop down menu
#59
marlekr
opened
1 year ago
1
Gene annotations
#58
wodanaz
opened
1 year ago
0
extract UMAP coordinates and cell metadata directly from ShinyCell app
#57
MubasherMohammed
opened
1 year ago
0
makeShinyFiles error: cannot get a slot ("data") from an object of type "NULL"
#56
sarah-chapin
opened
2 years ago
1
I have 3 single-cell datasets, can I switch between web pages？
#55
victorwang123
opened
2 years ago
2
AnnData: using a different (or multiple) fields in the var dataframe
#54
Xparx
opened
2 years ago
0
loading h5ad files
#53
Parul-Kudtarkar
closed
2 years ago
0
Feature Request: log transformed expression, correlation between meta data and expression values
#52
NMikolajewicz
opened
2 years ago
0
Plot Download for Bubble
#51
jibsch
opened
2 years ago
5
change colors for continuous scale?
#50
alpedroz
opened
2 years ago
1
error when less genes in the assay
#49
LinAU
closed
2 years ago
3
Factor with many levels fails to be visualized
#48
koenvandenberge
closed
2 years ago
3
Negative values in violin plot using RNA assay data slot
#47
ChristinaSteyn
opened
2 years ago
6
[Feature Request] Compatibility with Visium Data
#46
matthewdbradley
opened
2 years ago
1
Version of anndata for ShinyCell 2.1.0.
#45
bclopesrs
opened
2 years ago
5
ShinyCell Multi: Can I make another tab to display the UMAPS from two different tabs?
#44
shamsbhuiyan
opened
2 years ago
3
Warning: Error in setnames: Can't assign 3 names to a 5 column data.table
#43
shamsbhuiyan
closed
2 years ago
4
SCTransform
#42
sebozzie
closed
2 years ago
3
Scale gene expression
#41
Dorithockman
closed
2 years ago
2
Fixes bug in createConfig
#40
catavallejos
closed
2 years ago
2
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