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SPI-Birds
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pipelines
Pipelines for generating a standard data format for bird data
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KIL pipeline
#155
zuzulaz
closed
3 years ago
2
Create tests for ReRinging function (PFN)
#154
LiamDBailey
opened
3 years ago
0
Update standard format to contain Sex/Species conflicts in Capture_data
#153
ChloeRN
opened
3 years ago
0
PFN masterpipeline
#152
ChloeRN
closed
3 years ago
1
PEW pipeline: Create fake dates when the information is missing
#151
zuzulaz
opened
3 years ago
1
Update archive function
#150
LiamDBailey
opened
3 years ago
0
PEW pipeline changes to nestboxes
#149
zuzulaz
opened
3 years ago
0
PEW pipeline location data
#148
zuzulaz
opened
3 years ago
0
Update check C3: valid chick age values should be species-specific
#147
StefanVriend
opened
3 years ago
0
Add check to verify if brood dates are of the same year
#146
StefanVriend
opened
3 years ago
0
Add Warning & Error columns to standard format
#145
StefanVriend
opened
3 years ago
0
Quality check
#144
StefanVriend
closed
3 years ago
13
Add tests for column presence and format to the pipeline tests
#143
StefanVriend
closed
2 years ago
2
Check that parents are not of the same sex
#142
StefanVriend
closed
3 years ago
2
Archive update
#141
LiamDBailey
closed
3 years ago
6
Non-standard formats in pipelines_output
#140
ChloeRN
opened
3 years ago
0
Pew pipeline
#139
zuzulaz
closed
3 years ago
2
New calc functions
#138
zuzulaz
opened
3 years ago
0
Address issues with MON pipeline
#137
ChloeRN
opened
3 years ago
4
Non-conforming column names in HOC
#136
ChloeRN
opened
3 years ago
0
Add functionality to print pipeline names
#135
ChloeRN
opened
3 years ago
1
Fix Python library errors on Mac (HAR & KEV pipelines)
#134
ChloeRN
closed
3 years ago
6
Subsetting function
#133
ChloeRN
closed
3 years ago
9
Automated archiving function
#132
LiamDBailey
closed
3 years ago
1
Update/Combine meta-data
#131
LiamDBailey
opened
3 years ago
2
Internal data objects
#130
StefanVriend
closed
3 years ago
0
PFN pipeline corrections
#129
ChloeRN
closed
3 years ago
3
Standardise internal pipeline functions
#128
LiamDBailey
opened
3 years ago
1
Write a 'tips and tricks' document for developers.
#127
LiamDBailey
opened
3 years ago
0
Discuss chick measurement dates and the average columns
#126
LiamDBailey
opened
3 years ago
0
Discuss ExperimentIDs.
#125
LiamDBailey
opened
3 years ago
3
Discuss how we define 'unusual' values.
#124
LiamDBailey
closed
3 years ago
1
Discuss calc_clutchtype decisions
#123
LiamDBailey
opened
3 years ago
0
Change I4 (uncertainty in sex) from warning to error
#122
StefanVriend
closed
3 years ago
0
Update check B10
#121
StefanVriend
closed
3 years ago
0
Zuzana example test
#120
LiamDBailey
closed
3 years ago
0
Additional columns for next standard protocol update
#119
ChloeRN
opened
3 years ago
2
Update quality checks to v1.1.0
#118
StefanVriend
closed
3 years ago
0
Change reference value checks: compare with data rather than arbitrary values
#117
StefanVriend
closed
3 years ago
2
Create protocol for standard data quality check
#116
StefanVriend
closed
3 years ago
0
New quality checks
#115
StefanVriend
closed
3 years ago
6
Whitelist_PR2
#114
StefanVriend
closed
4 years ago
0
Add ExperimentID in Capture_data
#113
LiamDBailey
closed
3 years ago
6
Change wording of "whitelisting" procedure
#112
StefanVriend
closed
4 years ago
0
Pipeline for Ammersee (owner Niels Digemmanse)
#111
LiamDBailey
closed
4 years ago
5
How do we build pipeline vignette on Mac?
#110
LiamDBailey
opened
4 years ago
0
Ignore column checks when making the warning/error columns
#109
LiamDBailey
closed
4 years ago
2
Create unique CaptureID column
#108
LiamDBailey
closed
3 years ago
3
Include possibility of conflicted BroodID
#107
LiamDBailey
opened
4 years ago
0
Chick mass should be checked at 14 when age is unknown or wrong
#106
LiamDBailey
closed
3 years ago
0
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