Sage-Bionetworks annotator issues

Sage-Bionetworks / annotator

A Synapse annotations automation tool.

MIT License

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issues

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Maintain lower case boolean capitalization in json2table

#91 karawoo closed 4 years ago
3
Updating annotator to work with Python 3

#90 milen-sage opened 5 years ago
2
Update setup.py

#89 kdaily opened 6 years ago
1
change auto-versioning process

#88 kdaily opened 6 years ago
0
Add backup flag to methods which modify Pipeline state

#87 philerooski opened 6 years ago
0
Fixes to various Pipeline add links issues

#86 philerooski opened 6 years ago
0
Added removeLinks function

#85 philerooski opened 6 years ago
0
sudden change in data schema required changes in boolean type parsing

#84 teslajoy closed 6 years ago
0
check for missing items in dict and replaced pd with pandas

#83 teslajoy closed 6 years ago
0
allowed max column check

#82 teslajoy closed 6 years ago
0
Pretty print links

#81 philerooski closed 6 years ago
0
bool len

#80 teslajoy closed 6 years ago
1
Revert "parse through col types and assign max size and check max cols allowed"

#79 teslajoy closed 6 years ago
0
parse through col types and assign max size and check max cols allowed

#78 teslajoy closed 6 years ago
0
Ability to specify target during publish, raise error if view or target missing

#77 philerooski opened 6 years ago
0
Attempt str conversion when matching in column from regex, capture group optional

#76 philerooski opened 6 years ago
0
Print a more useful output during transferring links

#75 philerooski closed 6 years ago
0
colFromRegex fails if applying regular expression to non string

#74 philerooski opened 6 years ago
0
fix incorrect substituteColumnValues call in Pipeline

#73 philerooski closed 6 years ago
0
Change printed errors to raised exceptions

#72 philerooski closed 6 years ago
0
Unittests for Pipeline

#71 philerooski opened 6 years ago
0
Print two newlines after each column value count in Pipeline

#70 Yogendra0Sharma closed 6 years ago
2
Changes to clarify transferLinks actions

#69 philerooski closed 6 years ago
0
Raise error when attempting a publish without either an entityViewSchema or view set

#68 philerooski opened 6 years ago
0
Ability to add a view when there is not already a view set.

#67 philerooski opened 6 years ago
0
Print two newlines after each column value count in Pipeline

#66 philerooski closed 6 years ago
0
substituteColumnValues in Pipeline uses incorrect utils call

#65 philerooski closed 6 years ago
0
reformat setup of commandline scripts in package

#64 teslajoy closed 6 years ago
0
Hide Pipeline.links as private attribute and pretty print links with Pipeline.links()

#63 philerooski closed 6 years ago
0
add removeLinks function to Pipeline

#62 philerooski opened 6 years ago
0
"print"ed error messages should raise exception instead

#61 philerooski closed 6 years ago
0
Pipeline.addLinks issues

#60 philerooski opened 6 years ago
0
add .pytest_cache to .gitignore

#59 philerooski closed 6 years ago
0
Read sample files remotely, write locally to temp file before pushing to Synapse

#58 philerooski closed 6 years ago
0
update readme example with simple use-cases from annotation demo project

#57 teslajoy opened 6 years ago
0
changed setuppy + path to test csv files (should pull from synapse in future) + closes #51

#56 teslajoy closed 6 years ago
2
Add boolean backup flag to Pipeline methods which can backup before execution

#55 philerooski opened 6 years ago
0
Merge develop into master closes #44

#54 teslajoy closed 6 years ago
1
Raise exception when adding to a view's scope without a view already set

#53 philerooski closed 6 years ago
0
tests are not running

#52 kdaily opened 6 years ago
9
re-write tests in pytest

#51 kdaily closed 6 years ago
4
Add travis

#50 kdaily opened 6 years ago
14
Update setup.py

#49 kdaily closed 6 years ago
0
Update setup.py

#48 kdaily closed 6 years ago
1
Update setup.py

#47 kdaily closed 6 years ago
2
moving sync script here closes #41

#46 teslajoy closed 6 years ago
0
moving create_empty_file_view script and history

#45 teslajoy closed 6 years ago
0
fix master branch

#44 kdaily closed 6 years ago
1
Throw an exception when calling Pipeline.addView without a view already set

#43 philerooski opened 6 years ago
2
Create ability to count samples and/or patients

#42 sgosline opened 6 years ago
0