SainsburyWellcomeCentre aeon_mecha issues

SainsburyWellcomeCentre / aeon_mecha

Project Aeon's main library for interfacing with acquired data. Contains modules for raw data file io, data querying, data processing, data qc, database ingestion, and building computational data pipelines.

BSD 3-Clause "New" or "Revised" License

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add BlockSubjectPatch analysis & other minor fixes

#336 ttngu207 closed 8 months ago
0
Create a general function to assign events to subjects

#335 jkbhagatio opened 8 months ago
0
Update Aeon environment set-up instructions

#333 anayapouget opened 8 months ago
0
Create a "processed SLEAP data" table in database

#332 jkbhagatio opened 8 months ago
4
update: more robust check for subjects in a given block

#329 ttngu207 closed 8 months ago
0
Sleap model dir needs to be saved to metadata.yml

#328 jkbhagatio closed 4 months ago
3
`load()` tries to return indices it may not have

#327 jkbhagatio opened 9 months ago
12
fix: 🐛 specify docker path

#326 JaerongA closed 9 months ago
0
`SubjectVisits` stream cannot be loaded due to KeyErrors

#330 jkbhagatio closed 8 months ago
5
Model dir filepath should be saved to `metadata.yml`

#331 jkbhagatio closed 8 months ago
1
chore: 🔊 Create a logger for a cron job

#325 JaerongA closed 9 months ago
0
fix: 🐛 compose down workers first before removing images

#324 JaerongA closed 9 months ago
0
fix: bugfix in specsheet and tune worker

#323 ttngu207 closed 9 months ago
0
feat: ✨ add a cronjob script for dj workers

#322 JaerongA closed 9 months ago
0
social0.2 ingestion and worker setup for automation

#321 ttngu207 closed 9 months ago
0
Update octagon.py

#320 jerlich opened 9 months ago
1
SubjectState is not a reliable indication of subjects in the block, use identities from SLEAP data

#319 ttngu207 closed 9 months ago
0
docs: :memo: update sciviz README.md

#318 JaerongA closed 9 months ago
0
Add block analysis to sciviz

#317 JaerongA closed 9 months ago
0
Major cleanup - removing obsolete tables and previous analysis routines - update worker

#316 ttngu207 closed 9 months ago
0
fix: :bug: fix type hinting issue using 'from future import annotations

#315 JaerongA closed 9 months ago
0
Added social02 schema

#314 jkbhagatio closed 7 months ago
2
Bug fix & add block analysis plots

#313 JaerongA closed 9 months ago
0
Optimize pose reader

#311 glopesdev opened 9 months ago
0
Social schema

#310 jkbhagatio closed 7 months ago
1
Block-level analysis and plots - draft 1

#309 ttngu207 closed 9 months ago
0
Should change `class` column name returned in PoseReader

#308 jkbhagatio closed 4 months ago
1
Datajoint social01

#306 ttngu207 closed 9 months ago
0
Update social schema

#305 ttngu207 closed 7 months ago
1
Datajoint pipeline

#303 ttngu207 closed 9 months ago
1
Dataframe with missing columns returned when `load()` returns empty

#302 ttngu207 opened 9 months ago
3
Reader classes should be added to modules for social exps

#301 jkbhagatio opened 10 months ago
0
Docstring not correctly indented for Sphinx autodoc

#300 lochhh opened 10 months ago
0
Move `Columns` docs for Readers from the class docstring to the `read` method docstring

#299 jkbhagatio opened 10 months ago
3
Arbitrary Devices can't be created - pattern name must be shared across all Readers within a Device

#297 jkbhagatio closed 10 months ago
2
Use "all-versions" Zenodo DOI

#296 lochhh closed 10 months ago
1
Bug in `load` when trying to fill missing values for a set of timestamps

#294 jkbhagatio closed 4 months ago
2
Clashes in code terminology

#293 jkbhagatio opened 11 months ago
5
If using the `time` arg in `load`, the function errors if `time` is a pd.Series

#292 jkbhagatio opened 11 months ago
0
Rethink some Reader class names

#291 jkbhagatio opened 11 months ago
0
Bug introduced in BitmaskEvent Reader

#290 jkbhagatio opened 11 months ago
4
Add experiment devices & schema

#289 JaerongA closed 11 months ago
0
build: ➕ add libtiff5 to apt_requirements.txt

#287 JaerongA closed 11 months ago
0
build: :heavy_plus_sign: add pillow in pyproject.toml

#286 JaerongA closed 11 months ago
0
Merge main into datajoint_pipeline branch

#285 JaerongA closed 11 months ago
0
Fix epoch ingestion error

#284 JaerongA closed 11 months ago
0
Added citation

#283 jkbhagatio closed 11 months ago
1
Drop importlib_metadata dependency

#281 lochhh closed 11 months ago
1
Replace `importlib_metadata` with `importlib.metadata`

#280 lochhh closed 11 months ago
0
update food restriction procedure name

#279 ttngu207 closed 11 months ago
0

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