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SainsburyWellcomeCentre
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aeon_mecha
Project Aeon's main library for interfacing with acquired data. Contains modules for raw data file io, data querying, data processing, data qc, database ingestion, and building computational data pipelines.
BSD 3-Clause "New" or "Revised" License
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Update SciViz local setup
#346
lochhh
closed
5 months ago
0
Merge social branch into main post #342 merge
#345
jkbhagatio
closed
5 months ago
1
Overhaul linting and formatting
#344
jkbhagatio
opened
5 months ago
0
Introduce explicit object model for device streams
#342
glopesdev
closed
5 months ago
1
fix: :bug: fix KeyError in BlockDetection
#341
JaerongA
closed
5 months ago
3
KeyError instances from
#340
JaerongA
opened
5 months ago
5
feat: ✨ add SocialExperiment page in sciviz
#339
JaerongA
closed
6 months ago
0
Add BSD-3 license to project
#338
lochhh
closed
5 months ago
0
Add Patch Preference calculations to block_analysis
#337
jkbhagatio
opened
6 months ago
0
add BlockSubjectPatch analysis & other minor fixes
#336
ttngu207
closed
6 months ago
0
Create a general function to assign events to subjects
#335
jkbhagatio
opened
6 months ago
0
Update Aeon environment set-up instructions
#333
anayapouget
opened
6 months ago
0
Create a "processed SLEAP data" table in database
#332
jkbhagatio
opened
7 months ago
4
update: more robust check for subjects in a given block
#329
ttngu207
closed
7 months ago
0
Sleap model dir needs to be saved to metadata.yml
#328
jkbhagatio
closed
2 months ago
3
`load()` tries to return indices it may not have
#327
jkbhagatio
opened
7 months ago
12
fix: 🐛 specify docker path
#326
JaerongA
closed
7 months ago
0
`SubjectVisits` stream cannot be loaded due to KeyErrors
#330
jkbhagatio
closed
7 months ago
5
Model dir filepath should be saved to `metadata.yml`
#331
jkbhagatio
closed
7 months ago
1
chore: 🔊 Create a logger for a cron job
#325
JaerongA
closed
7 months ago
0
fix: 🐛 compose down workers first before removing images
#324
JaerongA
closed
7 months ago
0
fix: bugfix in specsheet and tune worker
#323
ttngu207
closed
7 months ago
0
feat: ✨ add a cronjob script for dj workers
#322
JaerongA
closed
7 months ago
0
social0.2 ingestion and worker setup for automation
#321
ttngu207
closed
7 months ago
0
Update octagon.py
#320
jerlich
opened
7 months ago
1
SubjectState is not a reliable indication of subjects in the block, use identities from SLEAP data
#319
ttngu207
closed
7 months ago
0
docs: :memo: update sciviz README.md
#318
JaerongA
closed
7 months ago
0
Add block analysis to sciviz
#317
JaerongA
closed
7 months ago
0
Major cleanup - removing obsolete tables and previous analysis routines - update worker
#316
ttngu207
closed
7 months ago
0
fix: :bug: fix type hinting issue using 'from future import annotations
#315
JaerongA
closed
7 months ago
0
Added social02 schema
#314
jkbhagatio
closed
5 months ago
2
Bug fix & add block analysis plots
#313
JaerongA
closed
7 months ago
0
Optimize pose reader
#311
glopesdev
opened
7 months ago
0
Social schema
#310
jkbhagatio
closed
5 months ago
1
Block-level analysis and plots - draft 1
#309
ttngu207
closed
7 months ago
0
Should change `class` column name returned in PoseReader
#308
jkbhagatio
closed
2 months ago
1
Datajoint social01
#306
ttngu207
closed
7 months ago
0
Update social schema
#305
ttngu207
closed
5 months ago
1
Datajoint pipeline
#303
ttngu207
closed
7 months ago
1
Dataframe with missing columns returned when `load()` returns empty
#302
ttngu207
opened
8 months ago
3
Reader classes should be added to modules for social exps
#301
jkbhagatio
opened
8 months ago
0
Docstring not correctly indented for Sphinx autodoc
#300
lochhh
opened
8 months ago
0
Move `Columns` docs for Readers from the class docstring to the `read` method docstring
#299
jkbhagatio
opened
8 months ago
3
Arbitrary Devices can't be created - pattern name must be shared across all Readers within a Device
#297
jkbhagatio
closed
8 months ago
2
Use "all-versions" Zenodo DOI
#296
lochhh
closed
8 months ago
1
Bug in `load` when trying to fill missing values for a set of timestamps
#294
jkbhagatio
closed
2 months ago
2
Clashes in code terminology
#293
jkbhagatio
opened
9 months ago
5
If using the `time` arg in `load`, the function errors if `time` is a pd.Series
#292
jkbhagatio
opened
9 months ago
0
Rethink some Reader class names
#291
jkbhagatio
opened
9 months ago
0
Bug introduced in BitmaskEvent Reader
#290
jkbhagatio
opened
9 months ago
4
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