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SciLifeLab
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bcbb
Useful bioinformatics code, primarily in Python and R
http://bcbio.wordpress.com
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Occasional zipimport.ZipImportError: bad local file header in bcbio_nextgen-0.3a-py2.7.egg
#205
brainstorm
closed
11 years ago
1
Public URL for the submodule
#204
guillermo-carrasco
closed
12 years ago
0
Typo in nextgen/README
#203
dakl
closed
12 years ago
0
Beginner manual
#202
dakl
closed
12 years ago
12
Develop
#201
b97pla
closed
12 years ago
0
Feature/casava18
#200
b97pla
closed
12 years ago
0
Use datetime for formatting
#199
percyfal
closed
12 years ago
0
Develop
#198
percyfal
closed
12 years ago
0
Feature/fastq gz in demultiplex
#197
vals
closed
12 years ago
4
calculation of ti/tv ratios on a case by case basis
#196
percyfal
closed
11 years ago
1
Feature/save diskspace dedupping
#195
vals
closed
12 years ago
5
Fix behaviour for when qseqs are not present, and refactoring.
#194
vals
closed
12 years ago
11
illumina_finished_msg.py reruns generate empty _fastq.gz files and overwrite md5sums
#193
brainstorm
closed
11 years ago
3
Temporary action regarding issue #191: Prepend empty string to sys.path
#192
vals
closed
12 years ago
0
bcbio.distributed.tasks.py only imports from it's containing directory
#191
vals
closed
11 years ago
2
bam file header info in rerun lanes
#190
percyfal
opened
12 years ago
0
Absolute file paths
#189
percyfal
closed
12 years ago
0
statusdb object equalities
#188
percyfal
closed
11 years ago
0
snpEff output for all samples in a project
#187
percyfal
closed
11 years ago
0
statusdb upload in casava
#186
percyfal
closed
11 years ago
0
Develop
#185
b97pla
closed
12 years ago
0
add genome for rat
#184
b97pla
closed
12 years ago
1
Develop
#183
b97pla
closed
12 years ago
1
Develop
#182
b97pla
closed
12 years ago
1
sample-specific genome build info is not used
#181
b97pla
closed
12 years ago
1
casava bcl_to_fastq should handle missing indexes
#180
b97pla
closed
11 years ago
1
upload_fastq has precedence over save_diskspace for fastq files
#179
percyfal
closed
12 years ago
5
Develop
#178
b97pla
closed
12 years ago
2
Develop
#177
b97pla
closed
12 years ago
0
Develop
#176
b97pla
closed
12 years ago
0
Feature/statusdb
#175
percyfal
closed
12 years ago
0
Feature/casava18
#174
vals
closed
12 years ago
0
Feature/casava18
#173
b97pla
closed
12 years ago
0
Feature/casava18
#172
vals
closed
12 years ago
0
Feature/casava18
#171
vals
closed
12 years ago
0
Transfer QC data to Status DB automatically
#170
percyfal
closed
12 years ago
1
Develop
#169
b97pla
closed
12 years ago
0
sort worksheet in project_read_counts by sample name
#168
b97pla
closed
11 years ago
1
convert double underscore in samplesheet to '.'
#167
b97pla
closed
12 years ago
0
Feature/casava18
#166
vals
closed
12 years ago
0
Feature/casava18
#165
vals
closed
12 years ago
0
Feature/casava18
#164
vals
closed
12 years ago
0
Develop
#163
b97pla
closed
12 years ago
0
fixed indentation bug
#162
b97pla
closed
12 years ago
0
bc.metrics -> .bc_metrics
#161
percyfal
closed
12 years ago
1
Feature/casava18
#160
vals
closed
12 years ago
2
Master - Monthly merge from Develop
#159
vals
closed
12 years ago
0
Develop
#158
b97pla
closed
12 years ago
0
Feature/casava18
#157
vals
closed
12 years ago
0
Develop - Removing '--compression' from rsync transfer.
#156
vals
closed
12 years ago
0
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