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ShixiangWang
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sigflow
Sigflow: Streamline Analysis Workflows for Mutational Signatures, https://github.com/ShixiangWang/sigflow/pkgs/container/sigflow
https://hub.docker.com/r/shixiangwang/sigflow
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Cannot set hg38 for genome in container model
#34
jpcartailler
closed
5 months ago
4
what is the input format of rearrangement signature ?
#33
Aimee2018
closed
1 year ago
5
奇怪的BUG：报错信息solving row 120798: 'allow.nonnarrowing' is FALSE and the supplied end (16581) is > refwidth
#32
b-niu
closed
2 years ago
2
Insufficient values in manual scale. 11 needed but only 9 provided.
#31
YingYa
closed
3 years ago
6
cannot open URL 'https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh'
#30
YingYa
closed
3 years ago
10
/usr/local/bin suggestion for installing
#29
ahorn720
closed
3 years ago
1
NOTION
#28
ShixiangWang
opened
3 years ago
0
Next release plan
#27
ShixiangWang
closed
3 years ago
1
Found another reference mistake
#26
PalashPandey
closed
3 years ago
3
Update sigflow.R
#25
PalashPandey
closed
3 years ago
3
Absolute copy number caller type CNVkit
#24
TnakaNY
closed
3 years ago
2
Mutational Signature Extraction Best Practice Implementation
#23
ShixiangWang
closed
3 years ago
0
Add release tags if build pass
#22
ShixiangWang
closed
3 years ago
2
copy select plot from sigprofiler to result directory
#21
ShixiangWang
closed
3 years ago
0
New auto-extract methods
#20
ShixiangWang
closed
3 years ago
2
Update README
#19
ShixiangWang
closed
3 years ago
3
A new cluster subcommand to cluster specified clusters
#18
ShixiangWang
closed
3 years ago
1
Check the docker build error in local machine: failed at 'test_vcf' in mode 'MAF'
#17
ShixiangWang
closed
3 years ago
1
An extra command for simulation study
#16
ShixiangWang
closed
3 years ago
1
bayesian NMF 和 sigprofiler 输出时将表格也输出
#15
ShixiangWang
closed
4 years ago
2
Support CN mode in fit
#14
ShixiangWang
closed
4 years ago
0
增加一个 show 命令
#13
ShixiangWang
closed
4 years ago
1
Create a new release v1.1
#12
ShixiangWang
closed
3 years ago
5
fit 和 bt 支持指定提取的 signature index
#11
ShixiangWang
closed
4 years ago
3
MAF mode 提取失败了，需要检查下是不是有问题。
#10
ShixiangWang
closed
4 years ago
1
部署到 hiplot 上
#9
ShixiangWang
closed
4 years ago
1
文章准备：框架和模板
#8
ShixiangWang
closed
4 years ago
3
extract 支持 sigprofiler
#7
ShixiangWang
closed
4 years ago
0
判断顺序都反了
#6
ShixiangWang
closed
4 years ago
1
Handle possible hypermutation in SBS/DBS/ID?
#5
ShixiangWang
closed
4 years ago
1
使用容器技术进行封装
#4
ShixiangWang
closed
4 years ago
6
完成基本功能并部署到 hiplot
#3
ShixiangWang
closed
4 years ago
1
名字显示
#2
ShixiangWang
closed
4 years ago
1
参数接收与解析
#1
ShixiangWang
closed
4 years ago
0