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ShunOuchi / GreenHill

De novo chromosome-level scaffolding and phasing tool using Hi-C
GNU General Public License v3.0
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Input files when using hifiasm #29

Closed S-111 closed 7 months ago

S-111 commented 7 months ago

When using the output of hifiasm, which files should I use as primaryBubble and secondaryBubble? hifiasm outputs two haplotype sequence files (including bubble sequences), but not bubble sequence files.

S-111 commented 7 months ago

I realized that I hadn't been able to see the closed issues, but the problems have been resolved by reviewing them now. Thank you.