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Snakemake-Profiles
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lsf
Snakemake profile for running jobs on an LSF cluster
MIT License
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Add per-rule configuration capability
#15
mbhall88
closed
4 years ago
2
Better naming of cluster log files
#14
mbhall88
closed
4 years ago
3
Ability to specify time limit (-W)
#13
funnell
closed
4 years ago
1
Add member
#12
mbhall88
closed
4 years ago
0
Specify memory units when submitting
#11
mbhall88
closed
4 years ago
0
Is it possible to use "immediate-submit" and "job dependencies"?
#10
kimin0402
opened
4 years ago
7
explicitly specify memory units
#9
funnell
closed
4 years ago
1
Avoid reading whole log file into memory
#8
mbhall88
closed
4 years ago
0
Allow configuration of per-rule cluster settings
#7
mbhall88
closed
4 years ago
5
Updating WAIT_BETWEEN_TRIES to 0.001 and TRY_TIMES to 1 in lsf_status.py
#6
leoisl
closed
4 years ago
0
Checking LSF log if bjobs fails
#5
leoisl
closed
4 years ago
6
Singularity availability on LSF
#4
concatenize
closed
4 years ago
1
Solving issue with `/` in the wildcards
#3
leoisl
closed
4 years ago
0
Better handling when the default cluster log directory does not exists
#2
leoisl
closed
5 years ago
0
Setup CI tests
#1
mbhall88
closed
4 years ago
1
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