GeneWikiCentral

GeneWiki Organization Project Page: https://www.wikidata.org/wiki/Wikidata:WikiProject_Gene_Wiki

Relevant Repos

Scheduled Bots

This is the repo for the bots that are running on Jenkins

• https://github.com/SuLab/scheduled-bots

Biothings

This is the repo for data sources that are updated through the Biothings.api

• https://github.com/SuLab/wdbiothings

wikidataintegrator

This repo contains a reusable module for reading from and writing to Wikidata

• https://github.com/SuLab/wikidataintegrator

wikidatasparqlexamples

Example SPARQL queries that demonstrate integrative potential of Wikidata

• https://www.wikidata.org/wiki/User:ProteinBoxBot/SPARQL_Examples

wikigenomes.org and Chlambase

Web application for viewing and annotating microbial genome data in Wikidata

• http://wikigenomes.org/
• https://github.com/SuLab/WikiGenomes.org
• https://github.com/SuLab/ChlamBase.org

Genewiki-ShEx

Shape Expressions for validating wikidata data models

• https://github.com/SuLab/Genewiki-ShEx

wikibase-jenkins

Jenkins Wikibase Bot Scheduling System: This docker image contains an example Jenkins setup with a Bot Trigger and a Bot, used for scheduling bot runs on Wikidata.

• https://github.com/SuLab/wikibase-jenkins

wikibase-tools

library to create local wikibase instance (for creating, for example, a CC-BY version of wikidata)

• https://github.com/SuLab/wikibase-tools

genewikiworld

library to create class-level diagrams like https://www.wikidata.org/wiki/Wikidata:WikiProject_Gene_Wiki#/media/File:Gene_wiki_world_network.png

• https://github.com/SuLab/genewikiworld