SuLab / WikiGenomesBase

A configurable codebase for launching organism specific WikiGenomes spinoff applications (e.g. ChlamBase.org) This is a web application framework for creating a model organism database leveraging the taxonomic, genetic and functional data that has been loaded to Wikidata.org by the Gene Wiki Project.
https://chlambase.org/
MIT License
7 stars 4 forks source link

Move EB/RB to expression module #164

Closed djow2019 closed 6 years ago

djow2019 commented 6 years ago

@khybiske How would you like it displayed? Two columns one side reticulate timing another elementary? Two columns one side generic expression timing, other EB/RB?

khybiske commented 6 years ago
screen shot 2018-07-26 at 10 31 32 am
khybiske commented 6 years ago

Something like this? Or, given all the whitespace, you could put mRNA as a left column, and RB/EB as a right column

khybiske commented 6 years ago

Note: I did multiple lines as an example for when 2 datasets may disagree.

djow2019 commented 6 years ago

Would the mRNA column be used to display the quantitative data?

djow2019 commented 6 years ago

I could also easily fit it in a single row, and maybe instead of a button for EB_and_RB, highlight both EB and RB individually

khybiske commented 6 years ago

mRNA is my shorthand for the RB expression timing (what's currently there)

djow2019 commented 6 years ago

Actually, if we are going to use multiple data sets to display EB/RB information, then I don't think we can use WikiData to store this information.

Thoughts @andrewsu ?

khybiske commented 6 years ago

It's a little apples and oranges, but the current module shows mRNA expression (microarray, although RNAseq data will be coming along soon). The RB/EB conveys which form the protein is found to be made in.

djow2019 commented 6 years ago

What do you think of this image.png

khybiske commented 6 years ago

Looks perfect to me. Does 'add annotation' allow for both columns? or just RB/EB?

djow2019 commented 6 years ago

Changed the dropdown to include EB/RB/Both; live now