BRANEnet

Embedding Multilayer Networks for Omics Data Integration

To reproduce the results, please run BRANEnet.ipynb 

To compute embedding for user input network, Please run following command.

multilayer_networkfile = multilayer/single layer network file in 'gml' or 'edgelist' format

T = widow size

d = embedding dimension

type = 'gml' or 'edgelist'

 python BRANEnet.py --multilayer_networkfile network_file.gml --T 3 --d 128 --type 'gml'