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TARGENE
/
targene-pipeline
Nextflow pipeline for Targeted-Learning of genetic effects
MIT License
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Week 06/11/2023
#110
olivierlabayle
closed
11 months ago
0
Port CV-Estimators to TarGene
#109
olivierlabayle
closed
11 months ago
0
Obstetric traits separatly?
#108
olivierlabayle
closed
5 months ago
0
VDR analysis
#107
olivierlabayle
closed
10 months ago
0
Deal with composite estimands
#106
olivierlabayle
closed
11 months ago
0
Week 30/10/2029
#105
olivierlabayle
closed
11 months ago
0
Week 23/10/2023
#104
olivierlabayle
closed
1 year ago
0
add memory constraint to thin by ld
#103
olivierlabayle
closed
1 year ago
0
Week 16/10/2023
#102
olivierlabayle
closed
1 year ago
0
for a 0.7.2 release
#101
olivierlabayle
closed
1 year ago
0
Week 09/10/2023
#100
olivierlabayle
closed
1 year ago
0
Week 25/09/2023
#99
olivierlabayle
closed
1 year ago
0
Week 18/09/23
#98
olivierlabayle
closed
1 year ago
0
Reading List
#97
olivierlabayle
closed
1 month ago
0
The automatic generation of interactions misses some estimands
#96
olivierlabayle
closed
10 months ago
1
Week 11/09/2023
#95
olivierlabayle
closed
1 year ago
0
Week 4/09/23
#94
olivierlabayle
closed
1 year ago
1
Week 28/08/23
#93
olivierlabayle
closed
1 year ago
1
TarGene paper
#92
olivierlabayle
closed
1 year ago
1
Rerun VDR
#91
olivierlabayle
closed
1 year ago
0
High dimensionality course
#90
olivierlabayle
closed
1 year ago
0
Identify limit dataset
#89
olivierlabayle
closed
1 year ago
0
C-CV-TMLE
#88
olivierlabayle
closed
6 months ago
1
C-TMLE
#87
olivierlabayle
closed
5 months ago
1
CV-TMLE
#86
olivierlabayle
closed
11 months ago
0
Some more experiment ideas
#85
olivierlabayle
closed
1 year ago
0
Update nextflow_params.md
#84
k-tetley-campbell
closed
1 year ago
0
Remove asint
#83
olivierlabayle
closed
1 year ago
0
Reading list
#82
olivierlabayle
closed
1 year ago
0
Run with JointStratifiedCV and no weighted fluctuation
#81
olivierlabayle
closed
1 year ago
0
update documentation
#80
olivierlabayle
closed
1 year ago
0
VDR scale up
#79
olivierlabayle
closed
4 months ago
1
Run VDR
#78
olivierlabayle
closed
1 year ago
0
Rerun obstretic traits with females only
#77
olivierlabayle
closed
1 year ago
0
VDR Analyses
#76
olivierlabayle
closed
1 year ago
0
Todo before publication
#75
olivierlabayle
closed
3 months ago
1
Weighted_fluct
#74
olivierlabayle
closed
1 year ago
0
update deps on TargetedEstimation
#73
olivierlabayle
closed
1 year ago
0
add multiprocessing for glmnet
#71
olivierlabayle
closed
1 year ago
0
Neg control pipeline
#70
olivierlabayle
closed
1 year ago
0
Minor misc changes
#69
olivierlabayle
closed
1 year ago
0
Negative control run
#68
olivierlabayle
closed
1 year ago
0
VDR run
#67
olivierlabayle
closed
1 year ago
0
Add conda environments to run the pipeline
#66
olivierlabayle
closed
1 month ago
0
add GENOTYPES_AS_INT param and update docs
#65
olivierlabayle
closed
1 year ago
0
add ATE with fixed eQTL to from_actors
#64
olivierlabayle
closed
3 months ago
0
Add One step estimate to TMLE.jl
#63
olivierlabayle
closed
1 year ago
0
Add option to split propensity score
#62
olivierlabayle
closed
1 year ago
0
Confounded CATE
#61
olivierlabayle
closed
1 month ago
0
Investigate sensitivity to MAF
#60
olivierlabayle
closed
3 months ago
0
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