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Tchanders
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NetworkInference.jl
Methods for inferring undirected networks from data
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PIDC method error and not generating any outputs [ERROR: LoadError: MethodError: no method matching setindex_shape_check(::Int64, ::Int64)]
#39
elhaam
opened
1 year ago
0
Error when a gene is always zero-expressed
#38
YazdanZ
opened
2 years ago
0
Question about the edge weight
#37
dongyuanwu
closed
1 year ago
4
Ensure positive PUC scores
#36
anncfs
closed
3 years ago
1
Feature request: select target genes to create network around
#35
ljschumacher
opened
3 years ago
0
Add Project.toml and update required version of InformationMeasures
#34
Tchanders
closed
3 years ago
0
Add a section about improving performance to README
#33
Tchanders
closed
3 years ago
0
Can I run in parallel?
#32
BW15061999
closed
3 years ago
1
get_nodes needs broadcasting `.=` in setindex!
#31
shf43
opened
3 years ago
1
How to get the weight matrix?
#30
Vivianstats
opened
4 years ago
3
MethodError: no method matching setindex_shape_check(::Int64, ::Int64)
#29
ChelseaCHENX
opened
4 years ago
2
signal (7): Bus error on 5000+ genes
#28
jlaw9
opened
5 years ago
2
Update for Julia 1.0
#27
Tchanders
closed
5 years ago
0
Update REQUIRE to add upper limit on Julia version
#26
Tchanders
closed
5 years ago
0
using NetworkInference error
#25
WenduoGu
closed
5 years ago
4
Fix tests
#24
Tchanders
closed
6 years ago
0
Update readme
#23
Tchanders
closed
6 years ago
0
Empirical Bayes now removes all edges that are in the unwanted tail + w0 is a parameter
#22
ananth-pallaseni
closed
6 years ago
0
Add option to specify null distribution form
#21
Tchanders
closed
6 years ago
0
Fix to make_priors
#20
ananth-pallaseni
closed
6 years ago
0
Add more empirical Bayes options
#19
Tchanders
closed
6 years ago
0
Added read_network_file
#18
ananth-pallaseni
closed
6 years ago
0
Added no-priors empirical_bayes function + tests
#17
ananth-pallaseni
closed
6 years ago
0
Empirical Bayes Hooks
#16
ananth-pallaseni
closed
6 years ago
0
Set patch coverage to false
#15
Tchanders
closed
6 years ago
0
Default to 1-tailed test in EB
#14
Tchanders
closed
6 years ago
0
Allow multiple files and weights to be specified in EB hook
#13
Tchanders
closed
6 years ago
0
Empirical Bayes hooks
#12
ananth-pallaseni
closed
6 years ago
1
Make docstrings for exported functions
#11
Tchanders
closed
6 years ago
0
Improve path to data in tests
#10
Tchanders
closed
6 years ago
0
Add method for getting adjacency matrix
#9
Tchanders
closed
6 years ago
0
Make naming scheme more generic
#8
Tchanders
closed
6 years ago
1
Small comment and README changes
#7
Tchanders
closed
7 years ago
1
Allow nightly tests to fail
#6
Tchanders
closed
7 years ago
0
Performance improvements
#5
Tchanders
closed
7 years ago
0
Add CLR and PUC algorithms
#4
Tchanders
closed
7 years ago
0
Update README and REQUIRE
#3
Tchanders
closed
7 years ago
0
Deprecation warnings
#2
Tchanders
closed
7 years ago
0
MI algorithm
#1
EmilyBennett
closed
7 years ago
0