Closed cgpu closed 2 years ago
After the CI test finishes with the Nextflow pipeline successfully completed, list the results files.
Add a command after nextflow run to display the tree structure view of results using the unix tree command
nextflow run
results
Implemented in https://github.com/TheJacksonLaboratory/splicing-pipelines-nf/pull/251. Initially added installation step for tree, but the GitHub hosted runners (aka the machines used for the CI) already have this installed as a basic dependency, therefore I finally removed.
Enhancement
After the CI test finishes with the Nextflow pipeline successfully completed, list the results files.
Solution
Add a command after
nextflow runto display the tree structure view ofresultsusing the unix tree commandImplemetation
Implemented in https://github.com/TheJacksonLaboratory/splicing-pipelines-nf/pull/251. Initially added installation step for tree, but the GitHub hosted runners (aka the machines used for the CI) already have this installed as a basic dependency, therefore I finally removed.