TheJacksonLaboratory / splicing-pipelines-nf

Repository for the Anczukow-Lab splicing pipeline
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Remove GTEX download option as obsolete #286

Closed Vlad-Dembrovskyi closed 2 years ago

Vlad-Dembrovskyi commented 2 years ago

GTEX option is not working anymore, because GTEX moved the files and changed the access method. Now we can only access GTEX files with Gen3-DRS download option, but the same manifest and credential files.

Update: new requirement- after removing existing GTEX option, rename Gen3-DRS to be new GTEX